Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (531), Expect = 3e-58
 Identities = 159/542 (29%), Positives = 265/542 (48%), Gaps = 52/542 (9%)

Query: 49  VVQRYAINFR---GSVHNRAIAIRDAVLVKDEAALNRHLAEIDQLKRDYQDS-------- 97
           +V+ YA  F    G    R   +RD +   D A L+      D +   YQ+         
Sbjct: 115 LVKNYASTFEAITGDFAARNQVVRDLL---DPAGLSMRENVTDVITAMYQEGDADGLFVA 171

Query: 98  -----AVMLDRLFANTTASAEETRLLGDIKAIETQALASTERVINLRRSNDTAGA-QDLL 151
                 +ML RLFA+    +       D K    Q L++ +  IN  +S ++A    D +
Sbjct: 172 ARSQEKLMLARLFASNFLISNREE---DYKRA-LQELSALDGTINGLKSVESATVIADKV 227

Query: 152 --LAQASVHYTEWLKRVNALIDFEEAHIKQRLDTV------------------QSAAGTF 191
             +      Y + LK V  +I  +   I + L+ +                  Q   G +
Sbjct: 228 EGIDTGRTQYRDALKAVYGIIQNQNGRIDEGLNVIGPKVAAVLQEYNKAIEQQQGELGLY 287

Query: 192 AM--------LMVLASAVAIILSVLVSLLIIRKVKATLGAEPEEVAEAIRRLADGELNQR 243
           A          +V+ +  A+++++ +++ ++R ++  +G EP E+A   R +A G L Q 
Sbjct: 288 AQQKSENAIDTVVVVAIAAMLMAIWLAITVVRAIRRPVGGEPREIASIAREIAGGNLGQN 347

Query: 244 IETRYPDSVMGILKNALARLSDTISEVRSAAQALRHSSVTLLSVASDNRQQINLQTSEAQ 303
                   +   +      L   +SE+  A++ L  SS  +L V  ++R+    Q  +  
Sbjct: 348 FLREGSTGIYAAMAEMNDNLRRIVSELNDASRTLGDSSSGMLGVTEESRKNSESQADQLA 407

Query: 304 HVAAAITQMAASVSEVSGYASAASKATILADAEVDSGHRLVGEVTVSIEELATILDHATL 363
           H A+A+ +M  +V +++  A  AS+    AD     G  +V +   SI  L   +   + 
Sbjct: 408 HTASAMQEMTHTVDDIARNAQRASEMASEADHHAQEGMGVVEDTRRSIMVLVDNITDVSG 467

Query: 364 RVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLATR 423
            +  +  ++EN+ ++++VI  IA QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+R
Sbjct: 468 IIENLEKETENVGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASR 527

Query: 424 TQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGKISQEVGAINAM 483
           TQ ST+EI+ +IG+LQ+ ++ + + M+ + + A  T  +   +  ALG I+  V AI  M
Sbjct: 528 TQNSTEEIQALIGRLQAESRRSVESMRVNVTEATQTSEKANKAIAALGAIADSVMAIRDM 587

Query: 484 NAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELAELADRLSTKVAFF 543
           N QIA  + +Q+     +  +V  I      +AAGSEQV+NS + ++E++ +LS  V  F
Sbjct: 588 NHQIAVAAEEQATVVGTINVSVEEISGLARMNAAGSEQVQNSANGISEISSKLSGIVGRF 647

Query: 544 NV 545
            +
Sbjct: 648 KL 649