Pairwise Alignments

Query, 387 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 391 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  261 bits (668), Expect = 2e-74
 Identities = 139/343 (40%), Positives = 201/343 (58%), Gaps = 12/343 (3%)

Query: 18  VLLALLILVV---------FPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQG 68
           +LLAL ++V           PL +  + +++ GKYLTYA +A+ L L WG+ GILSLG  
Sbjct: 20  ILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLVWGFCGILSLGHA 79

Query: 69  VFFGVGGYCMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPWLWQPFHSFSFTLAA 128
            FF +GGY M M+L  +     S      P +PDFM +    ELPW W  F  F F    
Sbjct: 80  AFFALGGYAMGMYLMRQIGARGS---YGNPLLPDFMVFLNWKELPWFWYGFDMFWFAALM 136

Query: 129 VIAVPVLLAFIIGMALFKRRVGDVYFSIVTQAIALILTVLIVGQQGLTGGVNGITDLKTL 188
           V+ VP LLAF+ G   F+ RV  VY SI+TQA+   L +         GG NG+TD K +
Sbjct: 137 VVLVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDI 196

Query: 189 LGWDLRTDSAKMILYFINAGLLFGCIFIGRFILASKLGRLLMAMRDKEERVRFSGYDVAS 248
           LG++++ D  +  L+  +A  L   + +   I+ SK G++L+A+RD E R RF GY V  
Sbjct: 197 LGFNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRTRFLGYRVEH 256

Query: 249 FKIFVFCVAAAFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGAL 308
            K+F F V+A  + + GA++  QVG ++P       SIE+VI+ AVGGR +L+G + GA+
Sbjct: 257 MKLFAFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGTLIGPIVGAI 316

Query: 309 LVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPNGLAGLWDSH 351
           LVN GK+ F+ +FPE WL+ +GGLF+ V ++ P G+ G   S+
Sbjct: 317 LVNGGKSIFTAAFPEFWLFALGGLFVLVTLFLPKGVVGTAQSY 359