Pairwise Alignments

Query, 305 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  241 bits (614), Expect = 4e-68
 Identities = 125/287 (43%), Positives = 181/287 (63%), Gaps = 1/287 (0%)

Query: 18  GLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTAHFAPGFQPYYFF 77
           GLS+  VLLL A+GLAI FG MG+INMAHGE + +GAYTT++   +     P    +   
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 78  FAIALSFLVAGAIGWLVEWAMISRLYKRPLDTLLATWGLSLVMQQTFRSVFGAREVSAEP 137
            A+ L+FLV GA+G  +E  +I  LY RPL+TLLATWG+SL++QQT R++FG        
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGN 367

Query: 138 PAWLMGSVNFTDAIEIPRNGLFMMALTLLLTAAIFLMLYRSRWGLQVRATVQNRLMSRAV 197
           P+W+ G+      + I  N L+++   L + AA+  +L ++  GLQ+RA  QNR M+ ++
Sbjct: 368 PSWMSGAFEL-GGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSM 426

Query: 198 GINTRKVDRMTFALGCGVAGVAGAAFTTIGSTGPTAGSQYIVDTFLVVVFGGAQSLFGTI 257
           GI T  VD +TFALG G+AG+AG A + I +  P  G  YI+D+F+VVVFGG  +L+GT+
Sbjct: 427 GIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTL 486

Query: 258 ASAFVIAQTQSLSEFFLSGSMAKVLTLSSVILILMLRPQGLFSIKVR 304
             AF +       E +    + K+L L  +IL +  RP+GLF++K R
Sbjct: 487 VGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALKGR 533