Pairwise Alignments

Query, 412 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 372 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 16/314 (5%)

Query: 50  VTVGQLHSATGTMAISETGSIQAERLAIEQINASGGILGRQIKVIQEDGASDWPTFAEKA 109
           +  G   + +G +A     ++ A +L  + INA GG+LG+Q++VI +D     P  A  A
Sbjct: 28  IKFGVAGAHSGDLASYGLPTVNAAKLVAKMINAKGGVLGKQVEVIPQDDQCK-PELATNA 86

Query: 110 KKLLVNDKVAAVFGCWTSASRKAVLPIFEKENGLLYYPTFYE-GLEQS---KNVIYTGQE 165
              LV+D    V G   S + KA LPI+++ N +L  P+     L QS    N   T   
Sbjct: 87  ATKLVSDGANVVLGHICSGATKAALPIYKEANIVLMSPSATNPALTQSGDYPNFFRTIAS 146

Query: 166 ATQQILASLDWIAKTKGAKTFYLVGSDYIWPRTSMKIARKHIENVLHGTVVGEDYYPLGN 225
             QQ    +D+     G K   ++     + +   + A++ +E    GTVV  +    G 
Sbjct: 147 DDQQAKLGVDFTIDKLGKKKIAVLHDKGDYGKGYAEYAKQFVEQSGKGTVVLFEGVTPGA 206

Query: 226 TQFGSLINKVKLKKPDVVFAAVVGGSNVAFYKQLNAAGVNSAKQTLLTLS---VTEDELL 282
             + +++ K++    +   A + GG +    K +    +   +  L  +S   V +D  +
Sbjct: 207 VDYSAVVQKIRNSGAE---AVMFGGYHPEASKIVQQ--LRKKRMDLPFVSDDGVKDDTFI 261

Query: 283 GIGGENMAGFYASMKYFQSLDNPNNKAFVEAFKAKYGKDAVIGDVTQAAYLGPWLWKAAV 342
            + G++  G YAS     S   P  K  +EA   ++G +   G   + AY        A+
Sbjct: 262 KVAGKDAEGVYASSSKDVSA-LPLYKEAIEAHVKEFGAEP--GAFYKEAYAASLALLNAI 318

Query: 343 EKAGSFDVDKVVAA 356
           EKAGS D  K++ A
Sbjct: 319 EKAGSTDSAKIMNA 332