Pairwise Alignments

Query, 1127 a.a., ATPase from Pseudomonas simiae WCS417

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  235 bits (600), Expect = 1e-65
 Identities = 163/494 (32%), Positives = 247/494 (50%), Gaps = 21/494 (4%)

Query: 638  VAQEESDRQTLLLMQEIDAHSLTDQALQQAKEASEAANAAKSRYVTGLSHELRTPLNSIL 697
            VAQ E  R  L L ++I      +  LQQAKEA+E+AN AK  ++  +SHE+RTP+N IL
Sbjct: 496  VAQPEDYRGHLWLFRDITERKHAELELQQAKEAAESANRAKGEFLANMSHEIRTPMNGIL 555

Query: 698  GFTQILQRDSAMPEQHQDALATILRSGSHLVSLIDGLLDVAKIEAGKLRLELTEIPFPEL 757
            G T  L  DSA+  + +D L  +  S   L+ +I+ +LD +KIEAGKL LE       +L
Sbjct: 556  GMTD-LALDSALTPEQRDYLEMVKSSADALLVIINDILDFSKIEAGKLELEHIHFHLRQL 614

Query: 758  LHDLEQMFTPQAHDKGLRFRLDCVGKIPAVVRGDEKRVRQILINLLGNAVNFTDSGEVRL 817
            L +  +    +A  + L  R +   ++     GD  R+RQ+LINL+GNA+ FT+ G+V +
Sbjct: 615  LRETLKPLELRARQRSLTLRCEVPEEVADGYLGDPGRLRQVLINLVGNAIKFTEEGQVAV 674

Query: 818  RVSYMRETANFEIIDTGIGIDPGQLERIFQPFERGD--LMRQDNGVGLGLTITRMLTALM 875
            RV       +F + DTGIGI   + + IF+ F + D  + R+  G GLGLTI   L  LM
Sbjct: 675  RVEARDGLLHFAVSDTGIGIPADKQQLIFEAFSQADSSVTRRFGGTGLGLTICTRLVRLM 734

Query: 876  GGELRVTSELDKGTCFQVRLFLSQVRAPQAVVHVEHDIIGYQGERRRILVVDDHVDHRKV 935
            GG + V S+  +G+ F     L  V  P      +           R+LV +D+  ++K+
Sbjct: 735  GGHMWVESDPGQGSTFHFTARLEAVAGPAESGEADAGRGEVVLPPLRLLVAEDNPVNQKL 794

Query: 936  LSGMLTPLGFEVIQASNGQDAIRQVALLAPDLILMDLSMPTLDGYETSRLIRRNALCTA- 994
            +  +L   G  V  A NGQ A+  +A    DL+LMD+ MP + G E +R IR        
Sbjct: 795  VLTLLQKRGHRVTLADNGQQALAALATDHFDLVLMDMQMPVMGGLEATRRIRAAEAARGD 854

Query: 995  ----PIIVISANAFTDDRERSIAAACNDYLAKPVRTPELLGRLQQHLDLHWLRRT----- 1045
                PI+ ++ANA   DRE  + A  + Y++KP+R  E    +   L    LR+      
Sbjct: 855  GQHLPIVAMTANAMAGDRELCLEAGMDGYVSKPLRRDEFFSAMADVLPPERLRQAGAAAA 914

Query: 1046 -----QRSIPPPPPRVLPGAEDLAVLAELSAIGYVRGLHEKLDTILAQQPDTEP-FISKV 1099
                 Q ++   P    P A      AE  A+  + G  E    ++    D  P ++ ++
Sbjct: 915  IPADGQAAVAAAPSESAPAALRRCDRAE--AVARLEGDEELFAMLVKMFSDDLPNYLQRL 972

Query: 1100 RGLLKGFRLDELNR 1113
               L G  ++ L+R
Sbjct: 973  NAALAGQDMEALSR 986