Pairwise Alignments

Query, 1127 a.a., ATPase from Pseudomonas simiae WCS417

Subject, 1085 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  604 bits (1557), Expect = e-176
 Identities = 359/866 (41%), Positives = 499/866 (57%), Gaps = 68/866 (7%)

Query: 9   RIVKIRRDYNTWVADETMEDYALRYTPKSFRKWSELRIANTALGAVSFLALEAIGGVLAL 68
           + +K RR YN  V +E +EDY+LR   KSFR+W    +ANTALG ++F+ALEAIG +L L
Sbjct: 14  KALKRRRIYNALVVNEAIEDYSLRSAAKSFRRWPCWLLANTALGGITFMALEAIGALLVL 73

Query: 69  NYGFTNTFWAILAISVVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASF 128
           N GF N+  AIL +S +I LTGLPISYYA+RY VD+DLLTRGAGFGY GST+TSLIYAS+
Sbjct: 74  NNGFVNSTLAILCVSAIIILTGLPISYYASRYNVDIDLLTRGAGFGYYGSTVTSLIYASY 133

Query: 129 TFLFFALEAAIMALALELYFHIPLALAYVICSLLVIPLVAYGVTLISRLQLWTQPIWLLL 188
           T +FFA+EAAIMA AL +   IP+ L Y+I S+++IPLV YG+T I++LQL+TQP+W++L
Sbjct: 134 TIIFFAIEAAIMAKALSVGLGIPIHLGYLISSVVIIPLVFYGITFINKLQLYTQPVWVVL 193

Query: 189 LVLPYGFVGWKNPDAFSDWTSFVGRSGDGGGFNLLAFCAACTVALSLVTQIGEQVDYLRF 248
            V+ + ++   +P A   W  + G+ G   GF+ L F  A +V  SLV QIGEQVDYLRF
Sbjct: 194 TVILFAYILTCDPTALDAWVEYTGKDGMAAGFDPLLFGGALSVLFSLVPQIGEQVDYLRF 253

Query: 249 LPEKTAANRKRWWAALLCAGPGWIIPGALKMFAGAFLAFLALQHE-IPMERAAEPTQMYL 307
           LP+KT  N+  WW ++  AGPGWI+ G LK+  G+FLA   +Q     +  A +P  +Y 
Sbjct: 254 LPDKTPENKGAWWLSMAAAGPGWIVVGCLKLLGGSFLAVYFMQKAGARISDALDPVNLYY 313

Query: 308 VAFRYVFSSPEWALGAMVLFVIISQMKINLTNAYAGSLAWSNFFARVTHSHPGRVVWLVF 367
             F  +  +    L    +FVI+ Q+KIN+TNAYAGSLAWSNFF+R++HSHPGR +WLVF
Sbjct: 314 NGFSALLGTGGLTLATTTIFVIVCQVKINVTNAYAGSLAWSNFFSRISHSHPGRALWLVF 373

Query: 368 NVAIALMLMELGVFDVIDQVLGLYANIAIAWIGTLVADLVINKPLGLSPRHIEFKRAHLY 427
           NV I+L+LM+ GVF ++  VL +YA  A++W+G L ADLVI KPLGLSPRHIE+KRA+LY
Sbjct: 374 NVTISLLLMQFGVFYLLHSVLMVYAMFAVSWVGALFADLVILKPLGLSPRHIEYKRANLY 433

Query: 428 DINPVGVGSMLIASLLSILAHFGLFGALAQAAPPFVALSTALVMAPLLAWLTQGKYYIAR 487
           ++NPVG G+ML+AS +S+L + G FG L QA  P VAL  ++  A  +A LT GKYY+AR
Sbjct: 434 NLNPVGFGAMLMASGVSLLCYRGAFGPLPQAFAPLVALVVSVPTAVGIALLTGGKYYMAR 493

Query: 488 TSDVQLIHPVAPATHAVCGLCSNPFETADMAFCPAYSTPICSLCCSLDARCGDRCKPHAR 547
            ++     PV+      C  C N +E  DM +CPAY  P+CSLCCSLD+ CG  CK  A 
Sbjct: 494 KAE-----PVSLTASTTCTTCGNSYEAGDMVYCPAYDEPVCSLCCSLDSVCGGFCKRLAH 548

Query: 548 LVTQFEGVLRWLLPNTMMPRLH-TRLA-----HYLGLLLALVLMLAGALALIYVQAAQGL 601
                +    W      +P LH +R A     H+  +  A  L+      L Y       
Sbjct: 549 ATAGRKEA--WDEAKIPLPFLHLSRRAKIFCLHFFNIFCAQALI----FVLCYAYFRNTG 602

Query: 602 PHSETLYQAFFKAFLTLSVLAAVLAWWVVLTRESRGVAQEESDRQTLLLMQEID------ 655
             S  L +     F+  S++  +  WW  L +E+R   ++E DR    L +E+       
Sbjct: 603 LGSPLLEEICATIFVFSSLINGIWVWWSSLIQETRLRTEDELDRHIHELNEEVKRREAMS 662

Query: 656 ---AHSLTDQALQQAKEASEAANAAKSRYVTGLSHELRTPLNSILGFTQILQRDSAMPEQ 712
              A S + Q L     +   A   + R V G +  +R     + G    L++ + MP  
Sbjct: 663 AQLAESASQQRLILENASIGIAYVREKRVVWGNNRFMR-----LCGLADDLRQGATMP-- 715

Query: 713 HQDALATILR---SGSHLVSLIDGLLDVAKIEAGKLRLELTEIPFPELLHDLEQMFTPQA 769
               L TIL    +G+ +++ +      A +  GK  +EL       + H   Q +    
Sbjct: 716 ----LGTILAKLGTGTDIMNEV----RAAHVSGGKFDVEL------PIFHSSTQQYW--- 758

Query: 770 HDKGLRFRLDCVGKIPAVVRGDEKRVRQILINLLGNAVNFTDSGEVRLRVSYMRETANFE 829
                     CV  +  V   D   V    I LL + +      E +LR S  R     E
Sbjct: 759 ----------CVLSVSVV---DPVHVEYGSIWLLDD-ITERKLAEEKLRHSEERLKELNE 804

Query: 830 IIDTGIGIDPGQLERIFQPFERGDLM 855
            +++ + +   +LER F+   + D M
Sbjct: 805 SLESQVRLRTEELERSFESVRQADKM 830



 Score = 70.1 bits (170), Expect = 9e-16
 Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 33/305 (10%)

Query: 628  WVVLTRESRGVAQEE---SDRQTLLLMQEIDAH-SLTDQALQQAKEASEAAN--AAKSRY 681
            W++     R +A+E+   S+ +   L + +++   L  + L+++ E+   A+  A+    
Sbjct: 777  WLLDDITERKLAEEKLRHSEERLKELNESLESQVRLRTEELERSFESVRQADKMASLGIL 836

Query: 682  VTGLSHELRTPLNSI---LGFTQ--------ILQRDS--------AMPEQH-QDALATIL 721
            V G++HE+  P + I   +G  Q        IL R+S         MP  + + ++  +L
Sbjct: 837  VAGVAHEINNPSSFIRMNIGLLQSIWDDSIHILDRESKKEDLWIAGMPFDYARKSIPKLL 896

Query: 722  RSGSHLVSLIDGLLDVAKIEAGKLRLELT-EIPFPELLHDLEQMFTPQAHDKGLRFRLDC 780
            R        +  ++   K  A ++ L+++  +   + +H   ++ T        R  ++ 
Sbjct: 897  RGIHQGAERVSTIICNLKDYARQVPLDMSGSVDLNKAVHSALELLTTPLRKATNRLVVET 956

Query: 781  VGKIPAVVRGDEKRVRQILINLLGNAVNFTDSGE--VRLRVSYMRETANFEIIDTGIGID 838
               +PA  RGD++R+ QIL+NL+ NA     +    + +R      T  FEI+D G GI 
Sbjct: 957  EDGLPAF-RGDQRRIEQILVNLIQNAYQALQNRRQGIHMRTYRADGTVCFEIVDEGHGIT 1015

Query: 839  PGQLERIFQPFERGDLMRQDNGVGLGLTITRMLTALMGGELRVTSELDKGTCFQVRLFLS 898
              QL  I  PF      R   G GLGL+++  +    GG ++ +SE  +GT   +R F +
Sbjct: 1016 QEQLTHICDPFY--TTKRDQGGTGLGLSVSAGIIKEHGGNMQFSSEPGRGTTVTLR-FQA 1072

Query: 899  QVRAP 903
              R P
Sbjct: 1073 PERPP 1077