Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 81/294 (27%), Positives = 113/294 (38%), Gaps = 20/294 (6%)

Query: 5   IALSCLSLALLASTAHAAPTLYLGMNGGTMERVYADKVLPAFEKANNVNVVIVPGTSSDI 64
           +ALS L   + A   HA   L +  +         +    AF +  NVN   V   S   
Sbjct: 10  LALSVLGSMMTAPLVHAEGRLVVYCSA---TNAMCEAGTKAFAEKYNVNTSFVRNGSGST 66

Query: 65  LAKVQANKDNPQMHVMFLDDGIMYRAIAMGLCDKLAP--SPTLEQI------PAKAKIKE 116
           LAK+ A K+NP+  V +   G +      G  D L    SP L  I      PAK K   
Sbjct: 67  LAKIDAEKNNPRADVWY--GGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGNY 124

Query: 117 EAVAVTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKDKVVFQSLASSTFGLHGFLMF 176
            + AV +G+ G G N +   +KG   P  W DL  P +K ++      SS         F
Sbjct: 125 SS-AVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183

Query: 177 NRIQGGDETNVDPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAIFPLTPTQVATQKL 236
             IQ  DE      FK   K    NV +Y  S    S      E AI        + ++ 
Sbjct: 184 --IQLWDEPTAFEYFKKLDK----NVSQYTKSGVTPSRNSARGEVAIGIGFLHDYSLEQA 237

Query: 237 LGVPMEYAQPKEGAVVLNVAECVIARNDQPELAQKLAAFLLTAEAQAPALEEGD 290
            G P+E   P EG         +I      + A+    ++L+ E Q  A ++GD
Sbjct: 238 KGAPLELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGD 291