Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 339 a.a., putative 2-aminoethylphosphonate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 6e-11
 Identities = 83/353 (23%), Positives = 130/353 (36%), Gaps = 42/353 (11%)

Query: 1   MNPRIALSCLSLALLASTAHAAP----TLYLGMNGGTMERVYADKVLPAFEKAN-NVNVV 55
           MN RI    L+      +AHA      T+Y       +      K   AFEK N ++ + 
Sbjct: 5   MNKRILKGTLTAIAALMSAHAFAGQEVTVYTAFETDLLA-----KYKSAFEKENPDIEIK 59

Query: 56  IVPGTSSDILAKVQANKDNPQMHVMFLDDGIMYRAIAM----GLCDKLAPSPTLEQIPAK 111
            V  ++  + AK+ A KDNP+  V++   G+   ++A+    G+     P    E    +
Sbjct: 60  WVRDSTGIMTAKLLAEKDNPRAEVVW---GLAGSSMALLKDQGVLKPYTPKGANE---LR 113

Query: 112 AKIKEEAVAVTLGVTGLGYNAKMF-----KEKGWAAPTSWMDLADPRFKDKVVFQSLASS 166
           A + +             +NA  F     K+     P SW DL +P +K  +   + ASS
Sbjct: 114 ANLNDPQAQQAWYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASS 173

Query: 167 TFGLHGFLMFNRIQGGDETNVDPGFKAWP--KTVGPNVLEYIASSAKISEMVQTDEAAIF 224
             G      + +  G D        KAW   + +  N+  Y  S +K        E AI 
Sbjct: 174 GTGYMQVSAWLQNMGED--------KAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIG 225

Query: 225 PLTPTQVATQKLLGVPMEYAQPK----EGAVVLNVAECVIARNDQPELAQKLAAFLLTAE 280
               T+ A  K  G P++   P     E   V  V E   A+        K A  L    
Sbjct: 226 ISMATRGAKLKTQGAPLDVIVPNGIGWESEAVGLVKESDAAKRVVDWSVSKAANELYI-- 283

Query: 281 AQAPALEEGDQIPSNPTTPTTDKTRARVEAMQ-GYLQTAISIDWDQVNQARPE 332
              P +   D     P  P  +K  A+++  Q G  +  +   W +   A+ E
Sbjct: 284 ESYPIVGHQDVSKQVPNYPNVEKVMAKMDFTQMGVDRARVLQTWSEKFDAKSE 336