Pairwise Alignments

Query, 436 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 439 a.a., ABC transporter for L-Fucose, periplasmic substrate-binding protein (from data) from Sinorhizobium meliloti 1021

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 16/259 (6%)

Query: 143 RTDLFKQAGLSMPAHPTWSQLGEFAAKLTAKDKGQYGMCLRGKAGWGENI-ALLSTMANA 201
           +T+   + G  +    TW+Q+ +  A+  A     YG    GK    E I      M  A
Sbjct: 162 KTEFKAKYGYDLAPPDTWAQVSD-QAEFFAAPPNFYGTQFAGKE---EAINGRFYEMLVA 217

Query: 202 FGARWFDEQWKPELTSPEWTAAANFYVNTLKQYG-PPGVSSNGFNETLALFNSGKCAIWV 260
            G  + D+  +P   S     A  ++V   K    PPG ++  +++    F SG  A+ +
Sbjct: 218 EGGEYLDKDGRPAFNSDAGVRALEWFVKLYKDKAVPPGTTNYLWDDLGQGFASGSIAVNL 277

Query: 261 DASVAGSFTTDKSQSKVADSVGFAAAPTEVTDKGSSWLYAWSLAIPATSKHKDAAKAFIS 320
           D     SF  D   SKVA +VG    P   + K + W      ++  +   K+AA + + 
Sbjct: 278 DWPGWASFFNDPKSSKVAGNVGVKVQPAGSSGKRTGWSGHHGFSVTESCADKEAAASLVW 337

Query: 321 WATSKDYIQLVADKEGITNVPPGTRQSTYSEAYLKAAPFAQVTLEMMKHADPAHPSAKPV 380
           W T++D     + K      P  TR + + +  +KAA       E+++    A   A PV
Sbjct: 338 WLTNED-----SQKLESAAGPLPTRSAVW-DFNIKAAEGDAYKTEVLQAFQEAAKHAFPV 391

Query: 381 P----YVGIQYVTIPEFQA 395
           P    ++ I     PE QA
Sbjct: 392 PQTAEWIEISNAVYPELQA 410