Pairwise Alignments

Query, 436 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 423 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE) (from data) from Sinorhizobium meliloti 1021

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 98/388 (25%), Positives = 161/388 (41%), Gaps = 32/388 (8%)

Query: 6   QALFLLSGLALAIPSHAADTVTIATVNNSDMIRMQRLSKVFEEQHPDIKLNWVVLEENVL 65
           + L   + +A AI   AA  +++A  +    +   R      E+    K+N V +  +  
Sbjct: 8   RTLISCAAIAGAIDLAAAAELSMAANSTGKNLSFLRDQIARFEKETGHKVNLVTMPASSS 67

Query: 66  RQRLTTDIATQGGQFDVLTIGTYETPLWGAKHWLEP---LTQLPPDYDADDIFPSVRQGL 122
            Q     +    G  DV     Y+T +  A    E    LT+   D   +  FPS+ Q  
Sbjct: 68  EQFSQYRLWLAAGNKDV---DVYQTDVIWAPQLAEQFVDLTEATKDVVGEH-FPSIIQSQ 123

Query: 123 SVNNTLYALPFYGESTVTYYRTDLFKQAGLSMPAHPTWSQLGEFAAKLTAKDKGQ----- 177
           +VN  L ALPFY ++   YYR DL  + G + P   TW +L   A ++  K++       
Sbjct: 124 TVNGKLVALPFYTDAPALYYRKDLLDKYGKTPP--KTWDELAATAKEVQDKERAAGSADI 181

Query: 178 YGMCLRGKAGWGENIALLSTMANAFGARWFDEQWKPELTSPEWTAAANFYVNTLKQYGPP 237
           +G   +G A  G     L  + ++ G +  +      + + +  AA       +    P 
Sbjct: 182 WGFVFQGNAYEGLTCNALEWIKSSGGGQIIEPDGTISVNNEKAAAAVEKVKEWIGTIAPK 241

Query: 238 GVSSNGFNETLALFNSGKCAI---WVDASVAGSFTTDKSQSKVADSVGFAAAPTEVTDKG 294
           GV +    E+  ++ +G       W  A   G+   D S  K    V    A T+  D+ 
Sbjct: 242 GVLAYQEEESRGVWQTGNAVFMRNWPYAYALGN--GDDSAVKGKFEVAPLPAATD-GDQP 298

Query: 295 SSWLYAWSLAIPATSKHKDAAKAFISWATSKDYIQLVADKEGITNVPPGTRQSTYSEAYL 354
           SS L  W+LA+   S  ++AA AF+ +  S +  ++ A +  ++N+P  T  + Y +  +
Sbjct: 299 SSTLGGWNLAVSKYSDEQEAAIAFVKFLGSAETQKVRAIE--LSNLP--TIAALYDDPEV 354

Query: 355 KAA-PFAQVTLEMMKHADPAHPSAKPVP 381
            AA PF       M H  P   SA P P
Sbjct: 355 AAAQPF-------MPHWKPIFQSAVPRP 375