Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (296), Expect = 2e-31
 Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 5/259 (1%)

Query: 41  WNHHPEFEIHLIRQGSGKLV----AGDYIGAFSAGHVALIGPDLPHDWIGELAPGDYLTG 96
           W++H E+E+ L +    + V    AGD IGA     + L GP LPH   G        T 
Sbjct: 34  WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTL 93

Query: 97  RDVVLQFDGAALLALRTTLPELGDLQPLFEHARRGLEFTGDTALQAARLMEAIGTA-HGL 155
              ++ F    L  L++ LP+   LQ L +HA  G+  +  TA + A L+  +    H  
Sbjct: 94  HSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQPHSY 153

Query: 156 QRLILFLKLLDTLKNAPTQQVKALTSPCYAPTLDARSAERINQAFDYLMRELTGDVRLSV 215
           Q L +   LL    +A  Q++        A T ++ + ++I  A  Y+ +     ++++ 
Sbjct: 154 QSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHYAQAIKITD 213

Query: 216 IAQQLEMSEPGFSRFFKRNTGHGFIDLMRKFRVQRACRLLLQSDMSVADICFEVGYANLS 275
           +  QL +SE    R F+++ G  F + +++FR+ +AC LL  S + +A I    G+ NLS
Sbjct: 214 LCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTGFGNLS 273

Query: 276 NFNRHFRIEMHQTPSDYRR 294
           NFNR F+     TP ++R+
Sbjct: 274 NFNRQFKTLKTMTPREFRQ 292