Pairwise Alignments

Query, 254 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (377), Expect = 4e-41
 Identities = 93/238 (39%), Positives = 132/238 (55%), Gaps = 6/238 (2%)

Query: 20  ART--YPRGLYVEPHSHDWGQLLYAMSGVMWVETPREALVVPPQRAVWLPPGVAHGIRVV 77
           ART  +P G  + PHSH W QL+YA+ GV  VETP  + VVPP RAVW+P G+ H +R  
Sbjct: 9   ARTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAA 68

Query: 78  SDLQMRNIY--LRPALAATLDSQVQVIEVGGLLRELIVTLVEEGDSGEAAYYDAVVSLAL 135
              Q R++Y  +  A AA L    +V+ V  L RELI+      D  +    D  +   L
Sbjct: 69  RGGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVL 128

Query: 136 LELQRARRSQIRIAMPVGVDRRLITACQAIMAAPSLEVAFEHHAETAGASVRTLSRLFQN 195
           L+   A  +Q  + +P   D R +   +A+ A P+     E  A  AGAS RTL+R F+ 
Sbjct: 129 LDQIAALPAQ-PLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRA 187

Query: 196 NLGMGFAEWRRQVQLATAVAELIQGQSVSAIARSLGY-SPSSFSDMFRRELGVAPSHY 252
           + G+ F +WR +++L  A+  L  G++V+A+A  +GY  PS+F  MFRR LG  P  Y
Sbjct: 188 DCGLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAY 245