Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  164 bits (415), Expect = 2e-45
 Identities = 102/307 (33%), Positives = 164/307 (53%), Gaps = 17/307 (5%)

Query: 4   LNELSFKALRLFVAVLDLGSFSEVARREGLAPSSISRQIQLMEQALGQQLLYRHTRAVSP 63
           ++E  ++ +  FVAV +   F+  A R G++ S ISRQI  +E+ L  +LLYR TR V+ 
Sbjct: 1   MSENRWEGIDEFVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTL 60

Query: 64  TEAGRLLGRHARLMLEQLEAAGQALQEQESEPSGLVRINAPMVFGQRHLSPWLGELCRRY 123
           TEAG+   +H + + +  E A +A+ +  SEP G++R+   + +G+R + P +      Y
Sbjct: 61  TEAGQTFLQHCQRLQDGREEALRAVGDLASEPKGMLRMTCAVAYGERFIVPLVTRFMGLY 120

Query: 124 PKLQLDIQQTDTYVDPLQDGTDLLFRIGVLNDSSMQARIFAPQRFRIAASPAYLIRHGTP 183
           P+L++DI+ ++  +D + +  DL  R+G L DS + A   AP+R  + ASP+YL R+G P
Sbjct: 121 PQLRVDIELSNRPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRP 180

Query: 184 KHPDELINHQCLAYKG----ITGQQRWFFRKGQGDWAPYSVKGPITGNHADTLTHAAEQG 239
               EL  H CL        +    R F ++ QG+W           N    +  AA QG
Sbjct: 181 HSLSELSRHNCLIGSSDIWQLEQNGREFSQRVQGNW---------RCNSGQAVLDAALQG 231

Query: 240 LGLVVFPSWLIGDSLRAGTLQAVLTEYEVATTLEPQQIAALWPGSRRLSLKVRTVIDYFV 299
           +GL   P + + + L +G L ++L  ++   T     + AL+P  R LS KVR ++DY  
Sbjct: 232 VGLCQLPDYYVLEHLHSGALISLLEAHQPPNT----AVWALYPQQRHLSPKVRKLVDYLK 287

Query: 300 ECFGGVP 306
           E   G P
Sbjct: 288 EGLAGRP 294