Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  172 bits (436), Expect = 9e-48
 Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 5/299 (1%)

Query: 12  LRLFVAVLDLGSFSEVARREGLAPSSISRQIQLMEQALGQQLLYRHTRAVSPTEAGRLLG 71
           + +F  V   GSFS  AR+ G++ S +S Q+  +E  LG QL+ R TR++S TEAG LL 
Sbjct: 8   IAIFTHVARAGSFSAAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEAGHLLY 67

Query: 72  RHARLMLEQLEAAGQALQEQESEPSGLVRINAPMVFGQRHLSPWLGELCRRYPKLQLDIQ 131
                +L   + A  ++        G++++     FG  H+ P L E   R+P+L+L + 
Sbjct: 68  VQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPEFMARHPELELQVS 127

Query: 132 QTDTYVDPLQDGTDLLFRIGVLNDSSMQARIFAPQRFRIAASPAYLIRHGTPKHPDELIN 191
             D  VD + +G DLL  +       M AR     +F + ASP Y+ RHG P  P++L++
Sbjct: 128 LLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPEYIARHGEPSRPEQLVD 187

Query: 192 HQCLAYKGITGQQR-WFFRKGQGDWAPYSVKGPITGNHADTLTHAAEQGLGLVVFPSWLI 250
           H CL Y G   +   W F++G  D+    V G    ++A  L  AA  GLG+V   S+L+
Sbjct: 188 HNCLVYHGEWHEHSVWQFKRGD-DYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLASYLM 246

Query: 251 GDSLRAGTLQAVLTEYEVATTLEPQQIAALWPGSRRLSLKVRTVIDYFVECFGGVPYWD 309
            D +  GTL  +L ++++   L  Q   A++P  + L+ KV + ID+     G  PYWD
Sbjct: 247 EDEINKGTLVPLLRDWQLTHHLPLQ---AVYPRRKHLAPKVSSFIDFIKNHIGTPPYWD 302