Pairwise Alignments

Query, 310 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (429), Expect = 6e-47
 Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 9/290 (3%)

Query: 15  FVAVLDLGSFSEVARREGLAPSSISRQIQLMEQALGQQLLYRHTRAVSPTEAGRLLGRHA 74
           FVAV +  +F+  A+R  ++ + +SRQI  +E  LG +L YR TR VS TE G +  RH 
Sbjct: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69

Query: 75  RLMLEQLEAAGQALQEQESEPSGLVRINAPMVFGQRHLSPWLGELCRRYPKLQLDIQQTD 134
           R +   LE A +A+ + +  P GLV++ AP+ +G++ + P L +   +YP ++ ++  T+
Sbjct: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129

Query: 135 TYVDPLQDGTDLLFRIGVLNDSSMQARIFAPQRFRIAASPAYLIRHGTPKHPDELINHQC 194
             +D ++ G DL  R+G L DSS+ A+  + +   +AASP+Y+ ++G P    EL  H C
Sbjct: 130 RTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQHNC 189

Query: 195 LAYKGITGQQRWFFRKGQGDWAPYSVKGPITGNHADTLTHAAEQGLGLVVFPSWLIGDSL 254
           L    I     W F +  G    + V+G +  N    L  AA +G+G+V  P + I + +
Sbjct: 190 L----IGNHNYWRFIE-HGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEEDI 244

Query: 255 RAGTLQAVLTEYEVATTLEPQQIAALWPGSRRLSLKVRTVIDYFVECFGG 304
            AG L + L  +  A     + I AL+P +R LS KVR ++DY  E   G
Sbjct: 245 HAGRLISFLDTHREA----KEGIWALYPQNRHLSAKVRVLVDYLAEKLTG 290