Pairwise Alignments

Query, 265 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  101 bits (251), Expect = 2e-26
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 4/224 (1%)

Query: 33  HTHRRGQFAYASTGALKMFTDLGNWVVPPQRAIWVPGGISHEMHMRGDVVMLNTYLNDDA 92
           H H++GQ  +A  G ++   D    ++PP +A+W+P G  H   M   V   + Y +  A
Sbjct: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93

Query: 93  AQRAGLQDYCQVFGVSPLLRHLLEAALAIGPSASPSVRDRCVLTLLIDEIGAMPELPLSA 152
            +     D+  +  V+ LL+ L++  +A+    +P        TL  +E  A        
Sbjct: 94  FK---CPDHITMIEVNALLKALIDK-MALWSWDTPQESMNNTTTLFWEEFYAAQRQTFHL 149

Query: 153 PLPSEARLARSCQRFLEAPTQKISICEMADWSSMSRRTFTRNFRECTGMTFVSWRQQVCL 212
           PLP+  R     ++ ++A      +  +A+    S +T TR F+  TGM++  W+QQ  L
Sbjct: 150 PLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRL 209

Query: 213 LEATARLSHGSSITDVAFELGFSSSSAFTSVFRRNLGDSPARYL 256
           L+A   LS  + +  V+  LGFSS SAF + F++  G +P  ++
Sbjct: 210 LKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253