Pairwise Alignments

Query, 313 a.a., peptidylprolyl isomerase from Pseudomonas simiae WCS417

Subject, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 33/126 (26%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 178 DSVRRQAQELSRRAQAAPADFAALATQFSQDTDSAARGGDSGMQPLQQLVPEVRSAVSRL 237
           +  ++Q  E  +R +     FA LA Q+SQD  SAA+ G+ G Q     VPE +  +  L
Sbjct: 299 EGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETL 358

Query: 238 KVGAVSDVVQSAAGFHVLKLTGQQPARTATLDELRERLTQALRAQRQEQIAKAYLEGMLN 297
            VG +S+  ++  G+H++++  ++     T   L+ +  + L  ++  + A A+L+ +  
Sbjct: 359 PVGQISEPFKTVHGWHIVEVLDRREV-DRTDSALKNKAYRILFNRKFNEEASAWLQELRA 417

Query: 298 TATLSI 303
           +A + +
Sbjct: 418 SAFVEV 423



 Score = 44.3 bits (103), Expect = 5e-09
 Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 10/167 (5%)

Query: 110 PDVEQQTRAAAEQIVFRDYMLS--VSQVPADYPSAAELQLAYDSGKAQWVTPPLYQVSQI 167
           P+  +Q R        R+ ++   ++ +PA+  + AEL         Q      Y++S I
Sbjct: 128 PEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQ------YKISHI 181

Query: 168 FLATHDPQTVDSVRRQAQELSRRAQAAPADFAALATQFSQDTDSAARGGDSGMQPLQQLV 227
            L   D Q   +    A +L    +   ADFA +A  +S+    A +GGD G    +++ 
Sbjct: 182 QLRVDDGQDKSTAETLANKLVNDLRNG-ADFAQMAYAYSKGP-KALQGGDWGWMRKEEMP 239

Query: 228 PEVRSAVSRLKVGAVSDVVQSAAGFHVLKLTGQQPARTATLDELRER 274
                 +     G++    +S  GFH+LK+   +   T  + E+  R
Sbjct: 240 TIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNAR 286