Pairwise Alignments

Query, 442 a.a., cysteine desulfhydrase from Pseudomonas simiae WCS417

Subject, 439 a.a., OprD family porin from Pseudomonas fluorescens SBW25-INTG

 Score =  288 bits (737), Expect = 2e-82
 Identities = 181/437 (41%), Positives = 243/437 (55%), Gaps = 29/437 (6%)

Query: 13  AHADFIDDSHADVTLLNRYLNQQGRDVVNSNAKAHSIRDWGQGFEFNFKSGYTDGPVGFG 72
           A ADF+ DS A++++ N Y N   RD   + +K     +WGQ F  N++SG+TDG VGFG
Sbjct: 23  ASADFLGDSKANLSMRNFYFNNDNRDGAAAPSKTE---EWGQAFILNYQSGFTDGTVGFG 79

Query: 73  LDLQAFYGLKLDSGGDLNDKDHQGRYPGS-MFPLDNGKSADQFGVLSPTFKMRFAQDELR 131
           LD     G+ LDSG         GR+ GS M P D+GK+ D +     T K RFA+ ELR
Sbjct: 80  LDAVGMLGVTLDSGA--------GRHVGSSMIPNDDGKAVDNWARGGATAKARFAKSELR 131

Query: 132 VGTLYGNNPILANTDGRLYQQTNTGVQLVSKDLSDFTFTGGDIFKTKIRNETGDQGMITA 191
            G L  N PIL + DGRL  Q+  G Q+ SKD+ + T TGG +  T  R  +   G+  A
Sbjct: 132 YGYLRPNLPILVSNDGRLLPQSFEGGQITSKDIDNLTLTGGQLQHTTGRGSSDRSGLAAA 191

Query: 192 GGTQQSDRFLFGGADYTGIQNTTVSLWYSNLEDYYQQFFLGAKRHDAL-SVGAIDTDLRV 250
           GGTQ+S+ F + GADY   ++  V  +Y+NLEDYYQQ F G      L   G++ TDLR 
Sbjct: 192 GGTQESNTFNYAGADYQVTKDLMVQYYYANLEDYYQQHFAGLIHVLPLGDYGSLKTDLRY 251

Query: 251 FRSLGVGGN--AAGDND-YAASGLYGDGASKGRINQTTASLLESYSLDGHTVGLGIQKNS 307
           F++   G N  AAG  + Y  SG   +G   G I+  T S    YSL  H +  G Q+ S
Sbjct: 252 FKTSSDGKNSSAAGRAEGYKISGFTKNG--NGEIDNNTWSAAFIYSLGPHAITAGYQQVS 309

Query: 308 GDSDFPYLDSG--LNSGDNRQGPGSGADTPALTNLQLNKFQHAGERTWLAQYKYDFGKLG 365
            DS+F  L+ G  +N G+       GA     T+  +  F  AGERT  AQY YDF  LG
Sbjct: 310 DDSNFAQLNQGGLVNKGE------GGASLYLYTDRTVQTFIQAGERTAFAQYAYDFASLG 363

Query: 366 LTGLTFSAAYAHGDDIRTAQGT-TSEWERNVAVAYQVPTGSLKGLGVTWKNAHASPDISG 424
           + GL  S  Y  GD I TA G   SEWER++++ Y V +G+ K +G  W+N  +  ++  
Sbjct: 364 VPGLKASLMYLKGDHILTASGNDASEWERDISLDYVVQSGTFKNVGFGWRNGVSRSEV-- 421

Query: 425 ATVQDENRFYVSYVVPL 441
           A  QD+NR +VSY +PL
Sbjct: 422 ARDQDQNRVFVSYSIPL 438