Pairwise Alignments

Query, 764 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 776 a.a., type II and III secretion system protein:NolW-like protein from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (542), Expect = 3e-59
 Identities = 198/754 (26%), Positives = 321/754 (42%), Gaps = 68/754 (9%)

Query: 13  PLLVLA----LSACSNPSTAPLLVDSELGQPLADTRRSGETVLDRQSEPAPKPPVQHRVT 68
           PLL LA    L  C++ S      +  L + L  T      V  R   P  +PP Q   +
Sbjct: 16  PLLCLATAVALGGCASQSDTLDPDNGMLQEALQGTGSQRPPVDPRSERPPVEPPSQQTTS 75

Query: 69  NSARG---------HAPAVVKARNPLGDQPVQLNFVDADIQAVVRAL-SRATGQQFLVDP 118
           +  R            PA   A        +  NF +  IQAV+ ++      + + +  
Sbjct: 76  SPQRQIIKGNQRFIRQPAAAPAARQAETGDIVFNFTNQPIQAVINSIMGDLLHENYSIAQ 135

Query: 119 RVKGNLTLVSEGQVPAHQAYDMLLAALRMQGFSVVDVGGVAQVVPEADA---KLLGGPIY 175
            VKG+++  +   V   QA  +L   L     +++  G    ++P   A   KL+     
Sbjct: 136 GVKGDVSFSTSKPVNKQQALSILETLLSWTDNAMIKQGNRYVILPSNQAVAGKLVPEMRV 195

Query: 176 TAGSSGMQTRTFRLQYENAVNLIPVLRPIVSPNNPINAYPGNNSIVITDYAENLARVAQI 235
              S+GM  R F L+Y +A  +  +L+P    N  +   P  N + +    E LA     
Sbjct: 196 AQPSAGMSARLFPLRYISATEMQKLLKPFARENAFLLVDPARNVLSLAGTPEELANYQDT 255

Query: 236 INGIDTP--SAIDTDVVRVQNGIAVDIAAMVSELLETQ-GADQTQKINVIGDPRSNSIII 292
           I+  D      +   V  +Q     ++   + ++   + G      +  +   R+NS++ 
Sbjct: 256 IDTFDVDWLKGMSVGVFGLQRASVGELMPELQKMFGPESGMPLAGMVRFLPIERTNSVVA 315

Query: 293 RSGSPERTELARNLIYKLDNAQSNPSNMHVVYLRNAQAGKLAQSLR-----GLLTGESDS 347
            S  PE        I+ +D    N   M+V  +RN +A  LA+ LR     G +  +S +
Sbjct: 316 ISSQPEYLHEVGEWIHTIDEGGGNEPQMYVYDVRNMKATDLAKYLRQIYGTGAIKDDSPA 375

Query: 348 GVSDDAR----GKLSAMGGNGKNTEGTSNAQNSSGTPTGSGVQSGYGQSTGSTTGTSGT- 402
            V+   R      L++ GG+G     +SN   S+G   G+G   G  QS  ++  ++ + 
Sbjct: 376 KVAPGLRTTTLSSLNSSGGSGVGGMSSSNGLGSNGGGMGNGGGFGNSQSMNNSQNSADSE 435

Query: 403 --------------SQDQDTSFSAGG-------VTIQADATTNTLLISAPDPLYRNLREV 441
                         S  QD S S+G          I A  ++N LL+      ++ +   
Sbjct: 436 SEGDDQGGGDSDSDSASQDGSGSSGASKSLDASTRITAQKSSNQLLVRTRPAQWKEIESA 495

Query: 442 IDMLDQRRAQVVIESLIVEVGEDDATEFGVQWQAGNLGGKGGFGGVNLGGSGVNSTPTSK 501
           I  LD    QV IE+ I+EV      + GVQW  G L G  G  G       V +T  S+
Sbjct: 496 IKRLDNPPLQVQIETRILEVKLTGELDMGVQWYLGRLAGNSGTTG------NVTNTAGSQ 549

Query: 502 TSIDVLPKGLNVGLVDGTVDIPGIGKVLD-LKVLARALKSKGGTNVLSTPNLLTLDNEAA 560
            +I         G    + D      V + L+V  RAL++ G T VLS P+L+ ++N+ A
Sbjct: 550 GAIGT------GGAALASTDAFFYSFVSNNLQVALRALETNGRTQVLSAPSLVVMNNQQA 603

Query: 561 SIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLDIYQEVS 620
            I VG  IP    S  T     +     +V+  + G+ L+V P+I+ GG V +DI Q+VS
Sbjct: 604 QIQVGDNIPISQTSINTNTN--TGTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVS 661

Query: 621 TVDERASVTAG--TVTNKRAIDTSILLDDGQIMVLGGLLQDGYSQSNDAVPWLSDIPGLG 678
             D   +  A      + R++ T +    GQ ++LGGL++   +++ +AVP+L  IPGL 
Sbjct: 662 DADSSGTTDANGNPRISTRSVATQVAAQSGQTVLLGGLIKQDNAETVNAVPYLGRIPGLR 721

Query: 679 ALFRNEKRSVSKTNLMVFLRPYIIRDSGAGRSIT 712
            LF N  +S  +T L+V + P +I  S   R +T
Sbjct: 722 WLFGNTSKSKDRTELIVLITPRVITSSSQARQVT 755