Pairwise Alignments

Query, 764 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 36/301 (11%)

Query: 411 SAGGVTIQADATTNTLLISAPDPL---YRNLREVIDMLDQRRAQVV-IESLIVEVGEDDA 466
           SA G  + + + T+ +  +  + +   +    EVI+ +    +Q V +    VE+  D  
Sbjct: 135 SANGRIVLSGSATDAVAATQAEQIASRFAGDEEVINSIKITSSQQVQLNVRFVEINRDVG 194

Query: 467 TEFGVQWQAGNLGGKGGFGGVNLGGSGVNSTPTSKTSIDVLPKGLNVGLVDGTVDIPGIG 526
            E G Q  A      G            NS+P + ++    P G  +G +        IG
Sbjct: 195 KELGTQISAAYAWSNGSVE--------FNSSPRATSNT---PAGSLIGSL--------IG 235

Query: 527 KVLDLKVLARALKSKGGTNVLSTPNLLTLDNEAASIFVGQTIPFVTGSYVTGGGGTSNNP 586
           +   + V   AL+ +G    L+ PNL+    E +S   G   P      ++   GT    
Sbjct: 236 EGYSVDVAIDALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIP----ISEQDGTI--- 288

Query: 587 FQTVQREEVGLKLNVRPQISEGGTVKLDIYQEVSTVDERASVTAGTVT----NKRAIDTS 642
             TV  ++ G+ L+  P +   G + LDI  EVS +D  AS   G +     + R   TS
Sbjct: 289 --TVSYKKFGVGLDFTPTVLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSVRRARTS 346

Query: 643 ILLDDGQIMVLGGLLQDGYSQSNDAVPWLSDIPGLGALFRNEKRSVSKTNLMVFLRPYII 702
           + L  GQ  ++ GLLQ   +     VP L  +P LGALF ++     +T+L++ + P+++
Sbjct: 347 VDLKSGQSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLV 406

Query: 703 R 703
           +
Sbjct: 407 K 407