Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 93.2 bits (230), Expect = 6e-24
 Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 13/293 (4%)

Query: 3   WDDARVFLAVCRESTLRGAARVLGVDQATVGRRVNALEKSLSATLFLRTSEGYALTAVGE 62
           WD    F+AV        AA+ L V  A V R++ ALE  L   LF RT+   +LT  G 
Sbjct: 4   WDGISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGT 63

Query: 63  AALLSVEKMERSALDLERQIQGLDDRLTGTVRVSTTDSLAIDFLIPSIARLHDKHPDVRV 122
                  +++    + ER I  L D   G V+++   +    F++P +     ++P V  
Sbjct: 64  IYYRHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVEC 123

Query: 123 QLDASTQILSLAKREADIAVRNTRPDNPDLIARRIARWPVGLFASQDYIDRHGVPEQGSL 182
            +D + + L L +   D+A+R  +  +  L+A+ ++     + AS  Y++++G P   S 
Sbjct: 124 NVDLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSE 183

Query: 183 FEGHDLVV----YQPYLQSQKDITLVAEPPGRGRIVAALSSSLLVRRSIAAGIGVGEIPV 238
              H+ ++    Y  +++  ++         RG+++   +S   +R +   GIG+ ++P 
Sbjct: 184 LNQHNCLIGNHNYWRFIEHGRERNFKV----RGKLIC--NSGYALRDAALKGIGIVQLPD 237

Query: 239 YTGERD---GLVRLWPERTRPLPYDVWLVTHADLRHTARVRVVIDEIVAAFAG 288
           Y  E D   G +  + +  R     +W +   +   +A+VRV++D +     G
Sbjct: 238 YYIEEDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKLTG 290