Pairwise Alignments

Query, 410 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 377 a.a., transporter from Sinorhizobium meliloti 1021

 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 100/377 (26%), Positives = 161/377 (42%), Gaps = 25/377 (6%)

Query: 25  VSIGLARFAYTPLIPTLIQAQWFSANDVVYLGAANLVGYLIGALIGRPIAQRTSNKTALR 84
           V++G  RF+YTP++P ++     S  D   + +AN +GYL GA++          +    
Sbjct: 3   VAMGFGRFSYTPILPAMMTDTGLSPADAGLVASANFIGYLAGAVLAGYRWAHGRERGVGL 62

Query: 85  MMMVAVTLAFFACGFPLSVVWFFAWRLLSGIAGGAIMVLVAATVLPHVPAARRGLASGAI 144
             +VA TL   A G   SV+ +   R L+G+A    M+ ++  VL    AAR        
Sbjct: 63  AALVATTLLLAAMGLTSSVLAYSIIRFLAGLASAFAMIFISGIVLGQGLAARSEHVPSVH 122

Query: 145 FLGIGLGIAGS--GTLVPPLLNL-GL---QQTWFGLGLLALVLTGASWFAWPTGTLHEA- 197
           F G+G GIA S     V PL  + GL   Q  WF   L+AL  T       P  + H A 
Sbjct: 123 FGGVGFGIALSSIAVWVAPLAGVAGLSMSQADWFVGALVALAGTVLVAALLP-ASRHAAN 181

Query: 198 ----AAPTGTSAPTPSGVYLLFAQYAFMAAGLVPAMVFLVDYVARGLGDGAHIGAMIWVM 253
                 P   S P    +  +   Y F   G V    FLV  +AR    G  +  + W++
Sbjct: 182 GGRPEVPLVRSRP----LMAMTLTYGFFGFGYVITATFLV-AMARDASGGHSVEFLAWLI 236

Query: 254 YGLGAIVGPVTYGFLADKLGARLSIRVVLVVQAIAVGLLPFTGSFTALAVLAVVLGSFPP 313
            G+ A +    + F   + G      + L+V+A+ + L     S  A  V  ++LG+   
Sbjct: 237 TGVSAALSVYLWRFAVPRFGLAGVYAIGLLVEAVGLVLTVSLPSPYAPLVGGLMLGATFM 296

Query: 314 GIVPLALARVHELLPNHHQQHVAWSRATVSFATFQALSGFAYSALFNSSGGQHALLFMIA 373
            +    L    +L P   ++ +A+   T +F   Q +       L   + G +AL  ++A
Sbjct: 297 MVTAYGLQIGRQLAPESPRRALAF--MTAAFGIGQIVGPLVAGWLAERT-GSYALPTLVA 353

Query: 374 AGAIVVALALELGMIVL 390
           A  +++      G++VL
Sbjct: 354 AVVLMIC-----GIVVL 365