Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score =  131 bits (330), Expect = 2e-35
 Identities = 97/309 (31%), Positives = 149/309 (48%), Gaps = 14/309 (4%)

Query: 4   VALMVYPNFQSLSL-SLGSVFECANLLRGE------PAYEFHLVSESGGAVMTSQGFSVN 56
           + L++YP  Q  ++  L  +F  AN +  E      P       S   G     + F  +
Sbjct: 10  IGLLLYPGAQLAAVYGLTDLFSVANRMAAERGAAKLPTLRVTHWSLQDGTSGIQRVF--D 67

Query: 57  TTPIRPEGYDTLIVSGYLEFRLPEANLLELVKAASAQSRR----VASLCMGIFVLAEAGL 112
           + P        +I+   LE R PEA++++   A   Q  +    + S+C G F+LAE GL
Sbjct: 68  SLPGSQRSPRIIILPPCLEAR-PEAHVIQPFAAWLGQCHQAGVTLGSVCAGAFLLAETGL 126

Query: 113 LEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGS 172
           L+G+  TTHW  A A R+R+P+++++ D++ + DG + T  G+ A  DL LA+VE  LG 
Sbjct: 127 LDGRTVTTHWGLAQALRERFPNVQVDADRMIVDDGDIITAGGLMAWTDLGLALVERLLGP 186

Query: 173 DLARRIARKLVIAQRRGSEQSQLSALLELDPKSDRVQLALAYARENLTHDLSVEALADVA 232
            +A   AR LVI   R S++   S    LD   + V     + +      + V A+A  A
Sbjct: 187 TIASETARYLVIDLTRQSQRYFSSFAPRLDHGDEAVLRVQRWLQSQSASAVPVAAMAAQA 246

Query: 233 RLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQA 292
            +  R F R FR  TG  P +  + LRV  AR ++E +   +E VA   G+ D    R+ 
Sbjct: 247 GMGERTFLRRFRAATGLKPTEYCQQLRVGKARELLELTNRGIEQVAWAVGYQDPGAFRKV 306

Query: 293 FLRAFGQPP 301
           F R  G  P
Sbjct: 307 FQRLVGLSP 315