Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  133 bits (335), Expect = 5e-36
 Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 13/312 (4%)

Query: 3   SVALMVYPNFQSLSLSLG-SVFECANLLRGEPAYEFHLVSESGGAVMTSQGFS--VNTTP 59
           S+   + PNF  L  S        AN + G  AY + L S  G  V +S G +  VNT+ 
Sbjct: 10  SLVFFLVPNFSMLPFSAAIETLRIANRMLGYEAYTWRLASTDGQKVYSSAGIALEVNTSL 69

Query: 60  IRPEGY--------DTLIVSGYLEFRLPEANLLELVKAASAQSRRVASLCMGIFVLAEAG 111
                Y          L+ SG         ++   ++ A  +   V SLC G  VL  AG
Sbjct: 70  ADERKYLGGESRPSMVLVCSGVYVEDFQNKSVNAWLREAYNRGIAVGSLCTGAHVLDSAG 129

Query: 112 LLEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLG 171
           LL GKR   HW + P F + +P   +  D L+ +DG+++T AG +A +D+ L +++ D G
Sbjct: 130 LLTGKRCAIHWENLPGFSESFPQADVYAD-LYEIDGNIYTCAGGTASLDMMLNLIDQDFG 188

Query: 172 SDLARRIARKLVIAQRRGSEQSQ-LSALLELDPKSDRVQLALAYARENLTHDLSVEALAD 230
            +L  R+  + +  + RG    Q L     L  ++ +V   +     NL+  LS+  +A+
Sbjct: 189 ENLVNRVCEQALTDRVRGPHDRQRLPLRARLGVQNAKVLSIIELMESNLSEPLSLLEIAE 248

Query: 231 VARLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMR 290
            A LS RQ  R+FR+E G++PA+    +R++ AR ++  S  PV  VA   GF       
Sbjct: 249 SADLSRRQIERLFRQEMGRSPARYYLEIRLDRARHLLIQSSMPVVEVAVACGFVSASHFS 308

Query: 291 QAFLRAFGQPPQ 302
           + +   + + PQ
Sbjct: 309 KCYRELYNRSPQ 320