Pairwise Alignments

Query, 427 a.a., porin from Pseudomonas simiae WCS417

Subject, 412 a.a., Tricarboxylate porin OpdH from Pseudomonas fluorescens FW300-N2E2

 Score =  355 bits (912), Expect = e-102
 Identities = 179/404 (44%), Positives = 258/404 (63%), Gaps = 19/404 (4%)

Query: 25  AQADFIKDSKADLDLKNYYFNRDYREDAGQSKREEWAQGFILNLKSGFTEGTVGFGVDVV 84
           AQADFI DSK  L+ +N+YFNRD+R++  + K +EWAQGF+L ++SG+T GTVGFG+D +
Sbjct: 27  AQADFIADSKGSLEARNFYFNRDFRQEGARDKAKEWAQGFLLRMESGYTAGTVGFGLDAL 86

Query: 85  GMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEYSKYGVTGKVRFAQSELRSGY 144
           GM G KLDS    +G+ LL  D          S  + D Y + G+T KVR + S L+ G 
Sbjct: 87  GMAGFKLDSGGGTAGTNLLPADR---------SGGSQDRYGELGLTAKVRVSNSTLKLGT 137

Query: 145 LLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQTKQRESTEYEDMGLTSQS 204
           L    P +  N +RL P TF+G  ++  +I  L L  GQ+ Q    +ST+Y+DM      
Sbjct: 138 LQIKDPAVSSNDTRLLPGTFKGGLLSVQEIDRLKLTAGQLTQINFVDSTDYQDMTANRIG 197

Query: 205 GAYKSTAKSDRFRFAGGDYKLTPGMTLSYHFAQLEDIYQQHFVGLKNSFALGGG-TLKTD 263
           G+      SD+F+FAG DY+  P +T  Y ++ LEDIYQQ+++G  ++  LG G + K+D
Sbjct: 198 GS------SDKFQFAGADYQFLPNLTAQYRYSLLEDIYQQNYLGFVHTLDLGAGQSFKSD 251

Query: 264 IRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQYGDTPFTYVDGTNTYLFS 323
           +RY  + + G+    ++DN+A      +S  GH+LG GYQ   GD PF Y+  ++ YL +
Sbjct: 252 VRYSRSTEDGS--FRELDNQAFGAMFTYSLAGHALGLGYQRMSGDDPFPYIGRSDPYLVN 309

Query: 324 EYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGDQAQVKGFAGEGREWERDID 383
             Q+ +F+  +ER W ARYD++FAA+GVPGLTF TR+  GD  Q +   GEG+EWER+ D
Sbjct: 310 FVQIGDFANIDERSWQARYDYNFAAIGVPGLTFMTRYITGDNVQ-RSAPGEGKEWERNTD 368

Query: 384 LGYVFQSGTLKGVSLRWRNGLSKANYLRDMNENRVIVGYTVALW 427
           + YV Q GTLKG+ L+WRN   ++N+  D++ENR+IV YT+ALW
Sbjct: 369 IAYVVQDGTLKGLGLKWRNATVRSNFGNDLDENRLIVSYTMALW 412