Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  384 bits (985), Expect = e-111
 Identities = 239/569 (42%), Positives = 323/569 (56%), Gaps = 47/569 (8%)

Query: 1   MSANPVLLNVEHLKIRVGEHGPL--AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGL 58
           M++   LL VE L+I     G    AV   +F I PG + ALVGESGSGK+  ++A +G+
Sbjct: 1   MTSGADLLRVEGLRITFSVLGGEVEAVRGANFRILPGRVTALVGESGSGKSAISQAIMGI 60

Query: 59  LPLPMQVCGGRLDFQGR-------DLASVSTEA--LRAIRGASIGMVFQEPMVSLNPALK 109
           LP    V GGR+ F          DL S+  +   ++ IRGA I  +FQEPM SL+P   
Sbjct: 61  LPSVASV-GGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHT 119

Query: 110 IGQQMSEALKLHTDLDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASV 169
           IG Q+SE LK+HTD D    RER   +L  +G    +R  + YP + SGGMRQR M+A  
Sbjct: 120 IGNQISEVLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMA 179

Query: 170 MLLRPALLIADEPTTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVM 229
           ++ RPALLIADEPTTALD   Q  +++L+ EL  +   A+L I+HDL +VA  A +VVV+
Sbjct: 180 LICRPALLIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVI 239

Query: 230 RHGKAVEQGSIEDILLAPKAEYTRQLLEALP--------RRGVLAPLPVSNEPLVEVDQV 281
            HG+ VE G ++ I   P+  Y + L+ A+P        R   L  +PV    +V  D+ 
Sbjct: 240 YHGEIVEAGPVDAIFRNPRHPYLKGLMAAVPHFDMKPGERLKALREVPVKAGAIVG-DRE 298

Query: 282 CIEHPGPTTF----------------W---GKRQHTRVVHSASLVIAPGETLALVGGSGS 322
             +  GP                   W   G     R V + S  I  GE L LVG SG 
Sbjct: 299 VKKAAGPNVLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGC 358

Query: 323 GKTTLGRSLVGLIKPCAGSIRFK----GVDILKAAN---RTHRLQCQMIFQDPYSSLNPR 375
           GKTT+ + L+  + P  G+I F      +D+LK      +  R + QM+FQDP SSL+PR
Sbjct: 359 GKTTVSKILMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSPR 418

Query: 376 MKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLGEQFVERFPHQLSGGQRQRVAIGRA 435
           M +  IL+EPL          R E V   L+ +GL ++F+ R+PH  SGGQRQR+ I RA
Sbjct: 419 MTVKNILSEPLEIHGRGTPKSREEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIARA 478

Query: 436 LVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVM 495
           L   PQL+I DEP+SALD+++Q QIL L + LQ + G   LFISH+LA V+ +A R+AVM
Sbjct: 479 LALVPQLLICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVM 538

Query: 496 HQGNVVEVGAREQIFDHPQHPYTRQLLAA 524
             G +VE+  RE +  +P HPYTR LLAA
Sbjct: 539 CAGRIVELAPREVLMRNPVHPYTRSLLAA 567



 Score =  156 bits (395), Expect = 2e-42
 Identities = 93/250 (37%), Positives = 138/250 (55%), Gaps = 18/250 (7%)

Query: 301 VHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCA---GSIRFKG-------VDIL 350
           V  A+  I PG   ALVG SGSGK+ + ++++G++   A   G + F         VD+L
Sbjct: 27  VRGANFRILPGRVTALVGESGSGKSAISQAIMGILPSVASVGGRVLFNDPEAEANPVDLL 86

Query: 351 KAANRTHRLQ------CQMIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQT 404
                   +Q         IFQ+P +SL+P   IG  ++E L+     + A RRER  + 
Sbjct: 87  SLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIGNQISEVLKIHTDADKAGRRERTEEL 146

Query: 405 LKDIGLGE--QFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILE 462
           L  +G  +  +  + +P +LSGG RQR  I  AL+  P L+IADEP +ALD+T+Q QIL+
Sbjct: 147 LGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALICRPALLIADEPTTALDVTVQAQILQ 206

Query: 463 LFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLL 522
           L   LQ++   A L I+HDL  V  +A  V V++ G +VE G  + IF +P+HPY + L+
Sbjct: 207 LLRELQSKLNMAMLLITHDLGVVANMADEVVVIYHGEIVEAGPVDAIFRNPRHPYLKGLM 266

Query: 523 AAASPLEQLP 532
           AA    +  P
Sbjct: 267 AAVPHFDMKP 276



 Score =  151 bits (382), Expect = 6e-41
 Identities = 93/241 (38%), Positives = 138/241 (57%), Gaps = 11/241 (4%)

Query: 24  AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVCGGRLDFQ----GRDLAS 79
           AVD++SF I  GE + LVGESG GKT  ++    +L   +    G + F       D+  
Sbjct: 336 AVDNVSFDIRRGECLGLVGESGCGKTTVSK----ILMRAVTPDKGTITFDDGEGALDVLK 391

Query: 80  VSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRERCLTMLRR 139
           +    L+A+R A I MVFQ+P+ SL+P + +   +SE L++H    P    E   ++L+ 
Sbjct: 392 LDGGELKALR-AKIQMVFQDPVSSLSPRMTVKNILSEPLEIHGRGTPKSREEHVRSLLQA 450

Query: 140 IGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQLDVIELML 199
           +G+   +R +  YPH FSGG RQRI +A  + L P LLI DEP +ALD   Q  ++ L+ 
Sbjct: 451 VGLD--QRFINRYPHSFSGGQRQRIGIARALALVPQLLICDEPVSALDVSVQAQILNLLK 508

Query: 200 ELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAEYTRQLLEAL 259
           +L +E G  +LFISH+L++V   A ++ VM  G+ VE    E ++  P   YTR LL A+
Sbjct: 509 DLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIVELAPREVLMRNPVHPYTRSLLAAV 568

Query: 260 P 260
           P
Sbjct: 569 P 569