Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  396 bits (1017), Expect = e-114
 Identities = 221/507 (43%), Positives = 313/507 (61%), Gaps = 8/507 (1%)

Query: 24  AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVCGGRLDFQGRDLASVSTE 83
           AV  +   +  GE +A+VGESGSGK+      +GLL     V G    ++G++L  ++ +
Sbjct: 27  AVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSAR-YRGQELVGLAPK 85

Query: 84  ALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRERCLTMLRRIGIK 143
           AL  +RG+ I M+FQEPM SL+P   IG+Q++E +  H      + R R L +L  +GI 
Sbjct: 86  ALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGSFKEARRRVLELLELVGIP 145

Query: 144 AAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQLDVIELMLELTR 203
              R ++SYPH+ SGG RQR+M+A  +   P +LIADEPTTALD   Q  +++L+  L R
Sbjct: 146 EPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQR 205

Query: 204 EQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAEYTRQLLEALPRRG 263
             G AI+ I+HDL +V  +A +V VMR G+ VEQG   DI   PK +YTR LLEA P  G
Sbjct: 206 RFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTADIFERPKGDYTRMLLEAEP-SG 264

Query: 264 VLAPLPVSNEPLVEVDQVCIEHPGP-TTFWGKRQHTRVVHSASLVIAPGETLALVGGSGS 322
             A  P +   ++E   V +++  P   F G     R V   +L +  G+T+ +VG SGS
Sbjct: 265 RKASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIVGESGS 324

Query: 323 GKTTLGRSLVGLIKPCAGSIRFKGVDIL---KAANRTHRLQCQMIFQDPYSSLNPRMKIG 379
           GK+TLGR+L+ L+ P +G  RF   DI    + A R  R Q Q++FQDPY SL+PR  +G
Sbjct: 325 GKSTLGRALLRLL-PSSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSPRRTVG 383

Query: 380 EILAEPLR-HEPGLNAAERRERVTQTLKDIGLGEQFVERFPHQLSGGQRQRVAIGRALVR 438
           EI+ E L  HEP L+ A+R  R    LK++GL      R+PH+ SGGQRQR+AI RA++ 
Sbjct: 384 EIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAIIL 443

Query: 439 HPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQG 498
            P++VI DEP SALD ++Q Q++EL   LQ ++G + +FISHDL+ V+ ++  V VM  G
Sbjct: 444 KPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSYIFISHDLSVVKAMSDYVIVMKNG 503

Query: 499 NVVEVGAREQIFDHPQHPYTRQLLAAA 525
            +VE G  + IFD P+ PYT+ L+ AA
Sbjct: 504 RIVEEGETDAIFDAPREPYTKTLIGAA 530