Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  403 bits (1036), Expect = e-117
 Identities = 221/507 (43%), Positives = 319/507 (62%), Gaps = 16/507 (3%)

Query: 24  AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPM-QVCGGRLDFQGRDLASVST 82
           AV  +S+ +  GE +A++GESGSGK++++ A + L+ +P  ++  G +   GRDL ++  
Sbjct: 24  AVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISSGEILLDGRDLLTMPA 83

Query: 83  EALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRERCLTMLRRIGI 142
           E  R + G  + M+FQ+P+  LNP   +G Q+SEA+  H  L   + RE  L +LRR+GI
Sbjct: 84  EERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH-GLAGSKAREEALRLLRRVGI 142

Query: 143 KAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQLDVIELMLELT 202
              ER +  YPH+FSGG RQR+M+A  + LRP LLIADEPTTALD   Q +V++L+ EL 
Sbjct: 143 PEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKELQ 202

Query: 203 REQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAEYTRQLLEALPRR 262
           RE G A+L I+HDL +V+  A +VVVM  G  VE G++ +I   P+  YT++L+ A P +
Sbjct: 203 RETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREIYKNPQHPYTQKLIAAAPGK 262

Query: 263 GVLAPLPVSNEPLVEVDQVCIEHPGPTTFWGKRQHTRVVHSASLVIAPGETLALVGGSGS 322
           G +       EPL+ V  V          +G  +    +   S  + PGET+A+VG SGS
Sbjct: 263 GAMHEPGARAEPLLSVRDV-------RKTYGSFE---ALKGISFDLMPGETMAVVGESGS 312

Query: 323 GKTTLGRSLVGLIKPCAGSIRFKGVDIL---KAANRTHRLQCQMIFQDPYSSLNPRMKIG 379
           GK+TL R+L+ L +P +G+  +KG D+     A     R   QM+FQDP  SLNPRM + 
Sbjct: 313 GKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVY 372

Query: 380 EILAEP-LRHEPGLNAAERRERVTQTLKDIGLGEQFVERFPHQLSGGQRQRVAIGRALVR 438
           ++++E  + H   L  A+ RERV + L  +GL  + + R+PHQ SGGQRQR+AI RAL  
Sbjct: 373 QLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALAL 432

Query: 439 HPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQG 498
            PQL+I DE +SALD+++Q Q++EL +RL+ + G A +FI+HDL  V   A  V VM QG
Sbjct: 433 EPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQG 492

Query: 499 NVVEVGAREQIFDHPQHPYTRQLLAAA 525
            VVE+G   ++FD P+  YTR LLAA+
Sbjct: 493 EVVELGTVREVFDTPRQAYTRALLAAS 519



 Score =  176 bits (445), Expect = 3e-48
 Identities = 108/281 (38%), Positives = 158/281 (56%), Gaps = 18/281 (6%)

Query: 273 EPLVEVDQVCIEHPGPTTFWGKRQHTRVVHSASLVIAPGETLALVGGSGSGKTTLGRSLV 332
           E L+EV  + +E      F         V S S  +  GETLA++G SGSGK+    +++
Sbjct: 3   EHLLEVRNLSVE------FHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIM 56

Query: 333 GLI-----KPCAGSIRFKGVDILKAANRTHR----LQCQMIFQDPYSSLNPRMKIGEILA 383
            LI     +  +G I   G D+L       R     +  MIFQDP S LNP   +G  ++
Sbjct: 57  NLIDMPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQIS 116

Query: 384 EPLRHEPGLNAAERRERVTQTLKDIGLGE--QFVERFPHQLSGGQRQRVAIGRALVRHPQ 441
           E +    GL  ++ RE   + L+ +G+ E  + + ++PH+ SGGQRQRV I  AL   P 
Sbjct: 117 EAMTTH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPD 175

Query: 442 LVIADEPISALDMTIQKQILELFERLQAQYGFACLFISHDLAAVERIAHRVAVMHQGNVV 501
           L+IADEP +ALD+T+Q ++L+L + LQ + G A L I+HDL  V  IA RV VM +G +V
Sbjct: 176 LLIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIV 235

Query: 502 EVGAREQIFDHPQHPYTRQLLAAASPLEQLPDGGYRIRPAI 542
           E G   +I+ +PQHPYT++L+AAA     + + G R  P +
Sbjct: 236 EAGTVREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLL 276