Pairwise Alignments
Query, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417
Subject, 541 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 411 bits (1057), Expect = e-119
Identities = 227/532 (42%), Positives = 330/532 (62%), Gaps = 12/532 (2%)
Query: 2 SANPVLLNVEHLKIRV--GEHGPLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLL 59
+A P++L+V L I + G P AV D+SF + PG++V L+GESGSGK++ A A +GLL
Sbjct: 5 TAPPMVLSVRDLTIALPPGADRPHAVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLL 64
Query: 60 PLPMQVCGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALK 119
P ++ G ++ +G+ L S S ALRA+RG ++ MVFQEPM +LNP + G Q+ E L
Sbjct: 65 PPGLRPVKGAIELRGQALLSCSQAALRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLA 124
Query: 120 LHTDLDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIA 179
H + R L ++ R+ + ER SYPHQ SGG RQRI++A ++L+PALLI
Sbjct: 125 QHVKRPKAERRAAILAIMERVRLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLIC 184
Query: 180 DEPTTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGS 239
DEPTTALD Q ++++L+LEL RE GTA+LFI+HD +VA A +VVV+ G +E+G
Sbjct: 185 DEPTTALDVTTQAEILKLILELQRENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGD 244
Query: 240 IEDILLAPKAEYTRQLLEALPRRGVLAPLPVSNE-PLVEVDQVCIEHPGPTTFW-GKRQH 297
+L AP+ YT+ LL A+P V N PL++ +C + + W GKR+
Sbjct: 245 KHAVLTAPRQPYTKMLLAAVPELSPPDRPAVENAYPLLQAKDLCKTY--VSGGWPGKRRV 302
Query: 298 TRVVHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAANR-- 355
+ SL++ PGET+ +VG SGSGK+T+ R + LI P +G I G + A R
Sbjct: 303 VQAAKGVSLMVRPGETIGIVGESGSGKSTVARCIARLIDPTSGDIFADGRSVATATKREL 362
Query: 356 -THRLQCQMIFQDPYSSLNPRMKIGEILAE-PLRHEPGLNAAERRERVTQTLKDIGLGEQ 413
R Q++FQDPY SLNPR +GE + E P+ G+ AE + + + + L
Sbjct: 363 SPFRRHVQVVFQDPYRSLNPRQTVGESIIEGPVNF--GVPRAEAWAKAEELMHLVRLKPD 420
Query: 414 FVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGF 473
+ R+P++ SGGQRQR++I RAL +P+++IADE +SALD+++Q QIL L E +Q +
Sbjct: 421 ALRRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRI 480
Query: 474 ACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAAA 525
LF++HDL +I V VM++G +VE GA +F P+HPYTR+LLAA+
Sbjct: 481 GILFVTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAAS 532
Score = 157 bits (397), Expect = 1e-42
Identities = 95/252 (37%), Positives = 138/252 (54%), Gaps = 16/252 (6%)
Query: 301 VHSASLVIAPGETLALVGGSGSGKTTLGRSLVGLI----KPCAGSIRFKGVDILKAANRT 356
V S + PG+ + L+G SGSGK+ + +++GL+ +P G+I +G +L +
Sbjct: 30 VSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPGLRPVKGAIELRGQALLSCSQAA 89
Query: 357 HRL----QCQMIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLGE 412
R M+FQ+P ++LNP M G + E L AERR + ++ + L E
Sbjct: 90 LRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQHVKRPKAERRAAILAIMERVRLPE 149
Query: 413 --QFVERFPHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQ 470
+ +PHQLSGGQRQR+ I AL+ P L+I DEP +ALD+T Q +IL+L LQ +
Sbjct: 150 PERIYASYPHQLSGGQRQRIVIAMALILKPALLICDEPTTALDVTTQAEILKLILELQRE 209
Query: 471 YGFACLFISHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAAASPLEQ 530
G A LFI+HD V IA V V+ G ++E G + + P+ PYT+ LLAA L
Sbjct: 210 NGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGDKHAVLTAPRQPYTKMLLAAVPELSP 269
Query: 531 LPDGGYRIRPAI 542
PD RPA+
Sbjct: 270 -PD-----RPAV 275
Score = 137 bits (345), Expect = 1e-36
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 8/239 (3%)
Query: 24 AVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLPMQVCGGRLDFQGRDLASVSTE 83
A +S + PGE + +VGESGSGK+ AR L+ G + GR +A+ +
Sbjct: 305 AAKGVSLMVRPGETIGIVGESGSGKSTVARCIARLI----DPTSGDIFADGRSVATATKR 360
Query: 84 ALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHTDLDPPQIRERCLTMLRRIGIK 143
L R + +VFQ+P SLNP +G+ + E ++ + + + ++ + +K
Sbjct: 361 ELSPFR-RHVQVVFQDPYRSLNPRQTVGESIIEG-PVNFGVPRAEAWAKAEELMHLVRLK 418
Query: 144 AAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEPTTALDCLAQLDVIELMLELTR 203
L YP++FSGG RQRI +A + P +LIADE +ALD Q ++ L+ E+
Sbjct: 419 PD--ALRRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQG 476
Query: 204 EQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIEDILLAPKAEYTRQLLEALPRR 262
ILF++HDL + ++ V+VM G+ VE+G+I D+ AP+ YTR+LL A P R
Sbjct: 477 RLRIGILFVTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAASPGR 535