Pairwise Alignments

Query, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 294 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  204 bits (518), Expect = 2e-57
 Identities = 109/289 (37%), Positives = 167/289 (57%), Gaps = 7/289 (2%)

Query: 3   STIAVPVAAKRRRV-----W--APANALIGGGLLVVLIALALMGLVWSPFDPLKIDLMSR 55
           S  A P   +RRR+     W  +     I    L++L+ ++L+    +P+DP+  D+ + 
Sbjct: 5   SLTAPPHQHRRRRMRRFLRWFVSDLRGAISLTFLLILLVISLLAPWIAPYDPVAQDIDAA 64

Query: 56  FQAPSAAHWLGTDEFGRDVFSRLLIGARTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTD 115
               SA HWLG D+ GRD  SRL+ G   SL+ S L V++AVL G  +G+LAGYL GW D
Sbjct: 65  LAPMSAQHWLGADDLGRDTLSRLIYGGMASLYASFLAVAIAVLIGVPVGILAGYLGGWVD 124

Query: 116 RVLMMFNDALLAFPGILMALGIMAIIGASKYGIVLALGIAYTPSVVRVVRGTVLSLRELE 175
            ++    D+ L+FP I++A+ +   +G      ++++GI + P + R+VR   L +R+  
Sbjct: 125 TMISRVIDSFLSFPAIVLAIAVTGALGIGLTNGMISVGIVFAPQLARLVRARTLVVRQEL 184

Query: 176 YIEASRVIGNSELYTMLRHIAPNCLAPLCVLATSMFGWALLSESALSFLGLGVPPPAATW 235
           Y++A+R  G S    + RH+ PN + P+ V  T +   ALL+E++LSFLGLG+ PP  +W
Sbjct: 185 YVDAARCFGGSTARILWRHVLPNAIQPVIVQVTLLLAAALLAEASLSFLGLGIQPPDPSW 244

Query: 236 GNMLASSRPYIASAPWLGVFPGLFICLTLLAINLFGDALRDRLDPRMRK 284
           G MLA +   +  AP     PGL I  T LA N  G++LR  LDP M++
Sbjct: 245 GAMLARAYQNMEIAPEQMYPPGLAILFTALAYNTLGESLRASLDPTMKR 293