Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 312 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  219 bits (558), Expect = 7e-62
 Identities = 123/312 (39%), Positives = 186/312 (59%), Gaps = 5/312 (1%)

Query: 3   RFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHSLV 62
           RF+L +    +P +  IS++ F L+RLIPGDPA  +LG  A P ++A +R   GLD  + 
Sbjct: 5   RFVLTRPLQFLPVIFGISIITFILVRLIPGDPARNLLGARATPSAIAKIRAQYGLDEPMW 64

Query: 63  TQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIAAW 122
            Q+  + K +   ++G SI  K  VL LI  R   +  +VL +V+ A LIAVP+  +AA 
Sbjct: 65  QQYFYFLKNLADGEMGKSILYKIDVLKLIATRVEPTIALVLSSVVLAVLIAVPMAALAAR 124

Query: 123 KQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGY-VSFSQAPWQAMSYM 181
               A D  +  ++T  +  P FWLGL+L+  F ++L  LPV GY  +F       ++++
Sbjct: 125 NSGKAPDHIVRVVSTFGIGFPPFWLGLMLMILFSVKLDVLPVSGYGATFGDK----LAHL 180

Query: 182 VLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTWT 241
           +LP +T+ L     + R  RA+ IE L+ +    ARA+G+ ER V W+H +PN+  PT  
Sbjct: 181 ILPSLTVALSLSTVLVRSLRAAMIESLKSDVATAARARGMPERIVFWRHVVPNSLVPTIN 240

Query: 242 LVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCVD 301
           L+ + +G L+GG  V+E+VF LPG+G+L+V AIF+RDY V+QG  ++     VLVN   D
Sbjct: 241 LLAVNIGWLIGGTVVVESVFALPGMGQLLVRAIFSRDYMVVQGVAMVFACATVLVNFIAD 300

Query: 302 LLYPLFDPRVKL 313
           ++    DPRVKL
Sbjct: 301 IVTVAVDPRVKL 312