Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  236 bits (603), Expect = 4e-67
 Identities = 128/333 (38%), Positives = 196/333 (58%), Gaps = 21/333 (6%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGD-MADPQSLADMRHTLGLDH 59
           M RF+L +LA+ +PT + +S++ F+ IRL+PGDP  L+ G+ +  P+  A++ H LG D 
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALLSGERVMSPERHAEISHQLGFDR 60

Query: 60  SLVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLI 119
            +V Q+L +   VL  D G SI TK+ V+   ++ F  +  + L A++FA ++ +P G++
Sbjct: 61  PIVMQYLDYLWGVLQGDFGTSIVTKKPVIDQFMELFPATVELSLCAIIFAVVVGIPAGVV 120

Query: 120 AAWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSF--------- 170
           AA K+ S  D  ++  A +  S+P FW GLLL+      L W PV G +S          
Sbjct: 121 AAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFFPSVTG 180

Query: 171 -----------SQAPWQAMSYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAK 219
                        A   A ++++LP + L  + +  I R  R++ +EVL  +Y+  ARAK
Sbjct: 181 FMLVDSLLSGQEGAFQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYVRTARAK 240

Query: 220 GLSERAVLWKHALPNAFAPTWTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDY 279
           GLS   V+  HAL NA  P  T +GL +G +L G  + ET+F+ PGIG+ MVD++F RDY
Sbjct: 241 GLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDSVFRRDY 300

Query: 280 PVLQGCLLLITFIYVLVNLCVDLLYPLFDPRVK 312
            V+QG LL+I  + +LVNL VDLLY L +PR++
Sbjct: 301 AVIQGGLLIIAAVIMLVNLAVDLLYGLINPRIR 333