Pairwise Alignments

Query, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  211 bits (537), Expect = 2e-59
 Identities = 115/314 (36%), Positives = 182/314 (57%), Gaps = 2/314 (0%)

Query: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60
           M  ++L++L   VP L  +S++VF ++ LIPGD A  +LG  A P+++  +   LGLD  
Sbjct: 1   MQAYVLKRLVAVVPVLFGLSIIVFLVMGLIPGDTATAILGSYATPENVERINRDLGLDKP 60

Query: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120
           LV Q+ IW   VL  D G S +  + VL  +L+RF  +  +  V+++  ++I +  G+++
Sbjct: 61  LVQQYAIWIGNVLQGDFGRSFALNRPVLDEVLERFQATLVLAGVSLVLCSVIGLLAGVVS 120

Query: 121 AWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVG-YVSFSQAPWQ-AM 178
           A +Q    D  +       +S PSFWLGLLL++ F +    LP  G Y  + +   +  +
Sbjct: 121 AVRQFGWADRVITFFVLAGISTPSFWLGLLLIYLFAVHWRILPASGMYAVYGRGDLKDLL 180

Query: 179 SYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAP 238
            +++LP  TL +V  G I R+ R + +EVLR +Y+  ARAKGL ER V++ HA   A   
Sbjct: 181 LHLILPAATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFRAALVS 240

Query: 239 TWTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNL 298
               +G+  G +LGG   +ETVF  PGIG ++V AI  RD  ++QG +L++   YVL NL
Sbjct: 241 VVPAIGIQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASYVLFNL 300

Query: 299 CVDLLYPLFDPRVK 312
             D++  + DPR++
Sbjct: 301 LADVVQSMLDPRIR 314