Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  120 bits (302), Expect = 1e-31
 Identities = 132/539 (24%), Positives = 226/539 (41%), Gaps = 91/539 (16%)

Query: 1   MNRLLNGTLCVTLALG----AGLAQAETALRVGLNADIRSTEPGVNRDENTDTVMLHIVE 56
           M  LL   +C    +G    A   +    + V    D+ + +P +  D    +++  + +
Sbjct: 1   MRNLLLAGVCTAALMGNPALADDIKQGGEMTVTYKDDVSTLDPAIGYDWQNWSMIKSLFD 60

Query: 57  GLVAHREDAS-VGPLLAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYLNP 115
           GL+ +    + + P LA   + S+DG  +TF LR  V F NG  LTAQDVK++ ER +NP
Sbjct: 61  GLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIERVVNP 120

Query: 116 KTQ---------WRCLAEFDGRGGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCGG 166
            TQ          + + E     G +++GI   DP T+ F L +P   FL  MA      
Sbjct: 121 ATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLHVMA---LNF 177

Query: 167 SGILHPDSLAADGS--WKAPIGTGPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKK 224
           + ++  + +   G+   K P+G+G F L EW  GQ +V  RF DY             + 
Sbjct: 178 AHVVPKEEVEKHGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDY-----------WNEG 226

Query: 225 TALVDAVRFMVIPDPSSAKAALMSNNIDLLPNVSASDAQELKSTPGVQISFSPIMAICGL 284
              +D + F V  +P  A   L +  ID+               PG  I  +  + +   
Sbjct: 227 LPKLDRITFEVGQEPVVALLRLQNGEIDV---------------PGDGIPPAKFVEV--- 268

Query: 285 LFQTNDPLLKD------------------------VRIRQAIAHSLDYGQMVTALSNGTS 320
              TNDP  KD                        V +R+A+  +++  +++  + NG +
Sbjct: 269 ---TNDPNFKDLIIRGGQLHTGYVTMNVKMAPFDKVEVRKAVNMAINKDRILRII-NGRA 324

Query: 321 EPNNSAIPQTSPFYSATAKQGYRYDPQEAQRLLKEAGY-HGQPIKMIVNKRYSQMFDMGL 379
              N  +P + P Y A    GY YDP+ A++LL++AG   G   ++ V     Q      
Sbjct: 325 VAANQPLPPSMPGY-AKDYAGYAYDPEGAKKLLEQAGLGDGFSTELYVMNTDPQPRIAQA 383

Query: 380 LSQAMAVASGLNIQMETLEWGTQLERYQSGNYQMMAFS-----YSSRLDPATSFDSLMGD 434
           + Q +  A G+   +++L     +      N   M +S      +   DP+  +  ++G 
Sbjct: 384 IQQDLK-AIGITASIKSLAQANVIAAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILGC 442

Query: 435 KTKEP---RKVW---DNPQAQAVLRDAVRE-SDTAKRQALFDQLHTMMIHDTPMVIIYN 486
               P      W   +    +A   DA+ + +  A+R+AL+  ++  ++ D P   I+N
Sbjct: 443 GGAVPGGWNWSWYCNEELDKKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPIFN 501