Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 504 a.a., peptide ABC transporter from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 3e-36
 Identities = 124/512 (24%), Positives = 222/512 (43%), Gaps = 32/512 (6%)

Query: 2   NRLLNGTLCVTLALGAGLAQAETALRVGLNADIRSTEPGVNRDENTDT-VMLHIVEGLV- 59
           N++        L L AG A+A   L +G   D  + +P +   +N D  V  ++ + LV 
Sbjct: 6   NKIGRAAFAAALMLSAGYAEAAGILSIGRREDSTTFDP-IKSAQNVDNWVFSNVFDVLVR 64

Query: 60  AHREDASVGPLLAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYLNPK-TQ 118
             +    + P LA     SDDG+TYTF +RD   F +G+ +TA+D  ++  R  + + + 
Sbjct: 65  VDKTGTKLEPGLAESWTLSDDGLTYTFKIRD-AKFSDGSPITAEDAAFSLLRIRDHEGSL 123

Query: 119 WRCLAEFDGRGGAKITGIDTPDPLTVVFHLDQPSGLFLASMARPDCGGSGILHPDSLAAD 178
           W    +        I   +  DP T+V  L  PS  FL+++A P+     +L   ++ A 
Sbjct: 124 WSDSYKI-------IETAEAADPKTLVVKLKTPSAPFLSTLALPNVS---VLSKKAVEAG 173

Query: 179 GSWKAPIGT---GPFSLGEWKPGQYVVLSRFKDYSPRDDAGPDGFTGKKTALVDAVRFMV 235
               A + T   G F++ EW+ G  V+L +  ++   D    DG           V ++ 
Sbjct: 174 EDAFAELPTASSGAFTVKEWRRGDRVILEKNPNFWQADRVKLDG-----------VEWIS 222

Query: 236 IPDPSSAKAALMSNNIDLLPNVSASDAQELKSTPGVQISFSPIMAICGLLFQTNDPLLKD 295
           +PD ++    + +  +D    V  S  +ELK  P + +          LL      +L  
Sbjct: 223 VPDDNTRMLNVQAGQLDTAIFVPFSRVEELKKDPNLTVHIDTSTREDHLLINHEHGMLAK 282

Query: 296 VRIRQAIAHSLDYGQMVTALSNGTSEPNNSAIPQTSPFYSATAKQGYRYDPQEAQRLLKE 355
             +RQA+  ++D   +V  ++ G     NS IP+ S  Y   A   Y YDP++A+ +L E
Sbjct: 283 KEVRQALDMAIDKKAIVDTVTFGIGTVANSYIPKGS-LYHYDANYQYPYDPEKAKAMLAE 341

Query: 356 AGYHGQPIKMIVNKRYSQMFDMGLLSQAMAVASGLNIQMETLEWGTQLERYQSGNYQMMA 415
           AG     +  +VN        + +L Q     +G+ + ++ ++     +   +G+Y +  
Sbjct: 342 AGASDLTLNYVVNAGNEVDEQIAVLLQQQFAKAGVTVNLQKVDASQSWDMLVAGDYDISV 401

Query: 416 FSYSSR-LDPATSFDSLMGDKTKEPRKVWDNPQAQAVLRDAVR-ESDTAKRQALFDQLHT 473
             +++  LDP      ++G  T        N +    L  A R E D AKR+A++  +  
Sbjct: 402 MYWTNDVLDPDQKTTFVLGHDTNMNYMTRYNSEKVKELVAAARLELDPAKREAMYVDIQK 461

Query: 474 MMIHDTPMVIIYNGTVAAALRDSVKGFHSWPV 505
               D   + +Y        R +++ F+  P+
Sbjct: 462 TAKDDVHWIDLYYSPYLNVSRKNIENFYQNPL 493