Pairwise Alignments

Query, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 542 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 3e-32
 Identities = 131/478 (27%), Positives = 208/478 (43%), Gaps = 58/478 (12%)

Query: 56  EGLVAHREDASVGPL--LAREVKRSDDGMTYTFTLRDRVHFQNGATLTAQDV-------- 105
           EGL+      + GP+  LA E KR DD  T    LR  V F NG  LTA DV        
Sbjct: 68  EGLILRDWMGNQGPVPGLATEWKRIDD-KTLELKLRQGVKFHNGDELTADDVVFSFSAQR 126

Query: 106 ----------KWTWERYLNPKTQWRCLAEFDGRGGA---KITGIDTPDPLTVVFHLDQPS 152
                     K  +E    P T     A   G G      + G++  D  TV FH   P 
Sbjct: 127 VFGDTQPAGGKTVFEDEHKPATAKELPAVVPGTGRRLWPALAGVEAVDKHTVRFHNATPD 186

Query: 153 GLFLASMARPDCGGSGILHP---DSLAADGSW-KAPIGTGPFSLGEWKPGQYVVLSRFKD 208
              +    R    GS I +    D  A    W + PI TGP+ +GE KP   + L  F D
Sbjct: 187 ---VTIEGRLYAFGSQIANRRAWDEAATYMDWARKPITTGPYMVGEHKPDVSLTLVAFDD 243

Query: 209 YSPRDDAGPDGFTGKKTALVDAVRFMVIPDPSSAKAALMSNNIDLLPNVSASDAQELKST 268
           Y          + G+    ++ +RF+ +P+ SS    L+S   D   ++       +++ 
Sbjct: 244 Y----------WGGRPP--LEQIRFVEVPEVSSRVNGLLSGEYDFACDLPPDQIAAVQAA 291

Query: 269 PGVQISFSPIMAICGLLFQTNDPLLKDVRIRQAIAHSLDYGQMVTALSNG-TSEPNNSAI 327
           PG ++  S I      +F   +P L+D  +R+A+ HS+D   +V AL +G T+ P     
Sbjct: 292 PGYEVQGSTIHNHRISVFNVQNPTLQDPLVRRAMTHSIDRQAIVDALWSGQTTVPAGLQF 351

Query: 328 PQTSPFYSATAKQGY---RYDPQEAQRLLKEAGYHGQPIKM-IVNKRYSQMFDMGLLSQA 383
               PFY     +G+    Y+PQ A+ LLK+A Y G  I   ++N  Y+     G +   
Sbjct: 352 ----PFYGDMFVEGWTVPEYNPQLAKDLLKQANYKGDAIPFRLLNNYYTNQTANGQIMVE 407

Query: 384 MAVASGLNIQMETLE-WGTQLERYQSGNYQMMAFSYSSRL-DPATSFDSLMGDKTK-EPR 440
           M    GLN++++  E WG   +   SG   +  +S  +   DP +S  +  G   + + +
Sbjct: 408 MWKQVGLNVEIQMKENWGQIHD--PSGAKGVRDWSAGAAFSDPVSSIVAQFGPNGEVQQK 465

Query: 441 KVWDNPQAQAVLRDAVRESDTAKRQALFDQLHTMMIHDTPMV-IIYNGTVAAALRDSV 497
           K W N +A  + +    E+D AKR+  F ++  +   + P+  +++   V   ++ S+
Sbjct: 466 KDWANAEANQMAQILETETDHAKRKKAFARMLEICEREDPVYQVLHQNAVFTGMKSSL 523