Pairwise Alignments

Query, 308 a.a., rhizopine-binding protein from Pseudomonas simiae WCS417

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (350), Expect = 8e-38
 Identities = 86/286 (30%), Positives = 154/286 (53%), Gaps = 10/286 (3%)

Query: 13  LLFSQWSFAAYR---IGVSIARVDDNFMTYVRTGLEAAARQQDVQIQFEDAQGDVVRQLN 69
           LL +  SF A     + + ++ +++ F   ++ G EA A++    +   D+Q D  ++L+
Sbjct: 14  LLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLIVLDSQNDPSKELS 73

Query: 70  QVEGFLNQKVDAVIVLPVDTAATANMTRAAVAAKTPLVYVNRHPDERTLPKGVVTVASND 129
            VE    + V A+++ P D+ A +N  R A  +K P++ ++R      +   V  +AS++
Sbjct: 74  NVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEV---VSHIASDN 130

Query: 130 IEAGQLQMRYLAEKLAGKGNVAIIMGDLAQNATHDRTEGAKQVLKDFPGIKVVEQQSADW 189
           +  G++   ++  K+     V  + G    +A  +R EG    +K    ++++  Q AD+
Sbjct: 131 VVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVKGSK-MQLLASQPADF 189

Query: 190 QRSKGMDLTSNWLLAGTQFDAIVANNDEMAIGAAMALQQAGKAKGDVAIVGIDGLPDGLA 249
            R+KG+++  N L A     A+ A NDEMA+GA  A+Q +GK+   V IVG DG  DG+A
Sbjct: 190 DRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAIQASGKS---VMIVGFDGTDDGIA 246

Query: 250 AIKRGLLTASVFQDPKAQATQAVQAAVRMIKGEAIEPEVWVPFELI 295
           A++RG L A+V Q P       ++ A +M+KGE +E  + V  ++I
Sbjct: 247 AVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVI 292