Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  137 bits (346), Expect = 1e-37
 Identities = 83/200 (41%), Positives = 119/200 (59%), Gaps = 9/200 (4%)

Query: 13  PFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRGTPLLVQLF 72
           P  + GA+ T+ L    +  GL++   L + R SR   V  L   Y+ FFRGTPLLVQLF
Sbjct: 11  PSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRGTPLLVQLF 70

Query: 73  LIYYGLPQVGIEL---------DPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAAA 123
           L+YYG+ Q  +           DP   A+I  +L+ AAY  EI+R AI ++  G+ EAA 
Sbjct: 71  LVYYGMAQFDVVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVPHGEIEAAR 130

Query: 124 SIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTF 183
           ++GM+R+Q L   ILP+A R  LP   N  I ++K +ALA+TI + EL   A+ ++ART+
Sbjct: 131 ALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMARKIAARTY 190

Query: 184 EIFTMYLSAALIYWILASIL 203
               M+L+A LIY ++A IL
Sbjct: 191 LHEEMFLTAGLIYLLIAFIL 210