Pairwise Alignments

Query, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (350), Expect = 4e-38
 Identities = 85/214 (39%), Positives = 120/214 (56%), Gaps = 5/214 (2%)

Query: 5   FQLALDSAPFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRG 64
           F L +DS P  L G + TV L    +  GLL    LA+ R S+ K  S  A  Y+ F RG
Sbjct: 3   FSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRG 62

Query: 65  TPLLVQLFLIYYGLPQVGIELDPIP-----AAMIGFSLNMAAYACEILRAAIGSIERGQW 119
           TPLLVQL+LIYYG+ Q     D +       A++ F LN +AY  EI+R AI  + +G+ 
Sbjct: 63  TPLLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEV 122

Query: 120 EAAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVS 179
           EAA + GM+R QT +R ILP A+R +LP   N  I ++  +A+A  + + +L   A+LV+
Sbjct: 123 EAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVN 182

Query: 180 ARTFEIFTMYLSAALIYWILASILAHLQNRLEDR 213
           +R +  F  +LSA L Y  L  I+     + E R
Sbjct: 183 SRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQR 216