Pairwise Alignments

Query, 407 a.a., transporter from Pseudomonas simiae WCS417

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  155 bits (392), Expect = 2e-42
 Identities = 123/393 (31%), Positives = 192/393 (48%), Gaps = 20/393 (5%)

Query: 22  MAVFSLAMGVFGLLTAEYLPASLLTPMAVDLGVSEALAGQAVTVTAVVALFAGLLVPGLT 81
           +A+F+L +  + + T E++   LL  +A DL ++  LAG  V+V A+   F   ++  LT
Sbjct: 3   LAIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTALT 62

Query: 82  RGIDRRVVLLGFSLLMIASNLLVAFSSSLAVLLLMRILLGVALGGFWSMAAAVAMRLVPA 141
             I+R+ +LLG   L I  N   A S +  VLL+ R+L   A G F+S+ + +A  LVP 
Sbjct: 63  GRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLVPE 122

Query: 142 ALLPRALSIIFSGIAVGTVVAVPLGSYLGGMYGWRSAFVAAAAVGGVTLAFQLFTLP-RL 200
                A++++F G+ V  V  VP+G+Y+G ++GWR+ F   + +G V  A     LP  L
Sbjct: 123 NRRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPGTL 182

Query: 201 APTGTARLRTVLDVLLRPGIAIGMFGCVLVHTGHFALFTYIRPFLESTTGVGTEGLALML 260
           A    A L   + VL    + I      L + G F  FT++ P L+  TG     ++L+L
Sbjct: 183 AKAAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSLIL 242

Query: 261 LGFGAANFVGTLLAGWMLVRYPLGTLVLMPVLVGLAALALVLLPASLPGQAL----LLAL 316
           + +G A  +G +  G +    P+  L+    L  L AL LV+   +     L    L AL
Sbjct: 243 VLYGVAIAIGNIAGGRIANTNPVKALI---GLFLLQALVLVIFSFTAVSPVLTLVTLAAL 299

Query: 317 WGMAFGGVPVAWSNWVARAV---PDQAESAGGMVVASVQSAIAAGAAGGGVM----FSLS 369
             ++F  VP      V  A+   P   + A  + +A+    IA GA  GG++    F LS
Sbjct: 300 GFLSFANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPFGLS 359

Query: 370 GIGGVFLGAGVLMVLAALLIALRVSV-PRSGAL 401
               V    G ++V  ALL+ L   V  R GA+
Sbjct: 360 ATPWV----GAILVSGALLLTLWSGVLDRRGAV 388