Pairwise Alignments

Query, 322 a.a., arabinose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  322 bits (824), Expect = 1e-92
 Identities = 166/303 (54%), Positives = 222/303 (73%)

Query: 18  RALLDNWAMLLAAVSIFLLCALLIDNFLSPLNMRGLGLAISTVGIAACTMLFCLASGHFD 77
           + LL    +L+   + F++ AL + NFL+  NM GL  ++ T+G+ ACTM+FCLAS  FD
Sbjct: 7   KLLLGEQGLLVIFAAAFVVVALTVPNFLTERNMLGLLQSVVTIGVVACTMMFCLASRDFD 66

Query: 78  LSVGSVIACAGVVAAIVMRDTDSVMLGIGAALLMGLMVGLINGIVIAKLRVNALITTLAT 137
           LSVGS +A +G+VA +    T S++LG+ AAL  G +VGL NGIVIA+ R+NALITTLAT
Sbjct: 67  LSVGSTVAFSGMVAVMASNATGSIVLGLLAALACGGIVGLANGIVIARFRINALITTLAT 126

Query: 138 MQIVRGLAYIFANGKAVGVSQDQFFVFGNGQLMGVPVPILITILCFLFFGWLLNYTTYGR 197
           MQIVRG A I ++G+AVG++   F+     + + VP PI +  L F+ FG+LLN T +G+
Sbjct: 127 MQIVRGFALIASDGRAVGINDPVFYQLSLSKFLTVPTPIWVMALFFIVFGFLLNRTVFGK 186

Query: 198 NTMAIGGNPEAALLAGVNVDRTKILIFAVHGVIGALAGVILASRMTSGQPMIGQGFELTV 257
           NT+AIGGNPEA+ LAGV+V R +I IFA+ G++ A+AGV+LASR+TSGQP    G EL+V
Sbjct: 187 NTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNAATGLELSV 246

Query: 258 ISACVLGGVSLSGGVGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSILLLAVVID 317
           ISACVLGGVSL+GG   +  V+ GVLI+ I EN MNL NI  FYQYV+RG ILL+AV++D
Sbjct: 247 ISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLILLIAVLLD 306

Query: 318 RMK 320
            M+
Sbjct: 307 NMR 309