Pairwise Alignments

Query, 500 a.a., L-arabinose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  385 bits (988), Expect = e-111
 Identities = 214/501 (42%), Positives = 323/501 (64%), Gaps = 4/501 (0%)

Query: 1   MTAAALRFDGIGKTFPGVKALDGISFSAHPGQVHALMGENGAGKSTLLKILGGAYIPNSG 60
           MT A L    I K FPGVKALD  S + +PG+V ALMGENGAGKSTL+K+L G Y  ++G
Sbjct: 1   MTQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAG 60

Query: 61  TLHIGEQVMAFKSAADSIASGVAVIHQELHLVPEMSVAENLFLG-HLPSRFGVVNRGLLR 119
           ++    Q ++FK   DS  +G+++IHQEL+L+P++++AEN+FLG  + S FG +    + 
Sbjct: 61  SIEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMH 120

Query: 120 KQALACLKGLADEIDPAEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDR 179
           ++A   L  L  +      LG LSLG++Q+VEIAKALS  + VI  DEPT +L+  E + 
Sbjct: 121 RKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETES 180

Query: 180 LMAIIARLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFEDMSALTHDQLVTCMV 239
           L  +I  LR++G  ++Y+SHR++E+F IC+ +TV +DG+++     +     D L+  MV
Sbjct: 181 LFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECR-VCDTNEDGLIEMMV 239

Query: 240 GRDIQDIYDYRPREHGEVALKVDGLLGPGLREPVSFNVRKGEILGLFGLVGAGRTELFRL 299
           GR +++ Y     + G+++L+V GL G G+ + VSF ++KGEILG+ GL+GAGRTEL ++
Sbjct: 240 GRKLEEQYPRIAAQQGDISLEVIGLTGSGVHD-VSFTLKKGEILGVSGLMGAGRTELMKV 298

Query: 300 LSGLERASAGQLELCGEPLHLQSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARG 359
           + G   +  G + L G  ++  SP+D +A G+    EDRK +G++   SV EN+++ A  
Sbjct: 299 IYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALD 358

Query: 360 AHSTFGWLLREGWEKGNADQQINAMKVKTPNAAQKIMYLSGGNQQKSILGRWLSMPMKVL 419
             S  G  +R   E    D  I    +KTP+  Q I  LSGGNQQK  + + L    KVL
Sbjct: 359 QLSK-GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVL 417

Query: 420 LLDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGIADRILVLCEGALRGEQ 479
           +LDEPTRG+D+GAK EIYQ+I+   A+G+++I+VSS++ EV+G++DRILV+ EG + GE 
Sbjct: 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477

Query: 480 TREHATESNLLQLALPRSVAN 500
               A +  L+  A+ R+ A+
Sbjct: 478 MASEADQEKLMACAVGRNPAH 498