Pairwise Alignments

Query, 500 a.a., L-arabinose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  364 bits (935), Expect = e-105
 Identities = 210/474 (44%), Positives = 294/474 (62%), Gaps = 9/474 (1%)

Query: 6   LRFDGIGKTFPGVKALDGISFSAHPGQVHALMGENGAGKSTLLKILGGAYIPNSGTLHIG 65
           L+   + K+F  V AL G+      G+VH L+GENGAGKSTL+KIL G +   SG + + 
Sbjct: 10  LKITDVTKSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHGATSGEIVLD 69

Query: 66  EQVMAFKSAADSIASGVAVIHQELHLVPEMSVAENLFLGHLPSRFGVVNRGLLRKQALAC 125
            Q     +  ++ + G+A++ QEL L   ++VAEN+     P RFG +N   L  +A   
Sbjct: 70  GQAYRPANPQEAASLGLAIVFQELSLCNNLTVAENILATREPRRFGFINDKALVAKAHRI 129

Query: 126 LKGLADEIDPAEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMAIIA 185
           +  L   ID  EK+G LS+ QRQLVEIAK LS  A V+  DEPTSSLS  E + L  II 
Sbjct: 130 VADLRLPIDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEAEILFEIIG 189

Query: 186 RLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFEDMSALTHDQLVTCMVGRDIQD 245
           RLR  G  ++Y+SHRMEE+ R+ + +TV +DG YV T      +T + L+  MVGR + +
Sbjct: 190 RLRQRGAAIIYISHRMEEIMRLSDDITVIRDGEYVST-HARDEVTIETLIALMVGRRMDE 248

Query: 246 IYDYRPREHGEVA-----LKVDGLLGPGLREPVSFNVRKGEILGLFGLVGAGRTELFRLL 300
           IY   P  H   A     L VD L   G  + VSF+VR GEILG FGLVG+GR+E+   L
Sbjct: 249 IYP--PPVHHVAADRAPVLAVDRLTREGEFQDVSFDVRAGEILGFFGLVGSGRSEVMNAL 306

Query: 301 SGLERASAGQLELCGEPLHLQSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARGA 360
            G+ +++AG + L GE +  +SP  AIA GV    E+RK+EG++   SV  NI+++A   
Sbjct: 307 FGM-KSAAGTVRLDGEVVRFRSPDQAIARGVGFVTENRKEEGLVLGHSVEWNISMAALAD 365

Query: 361 HSTFGWLLREGWEKGNADQQINAMKVKTPNAAQKIMYLSGGNQQKSILGRWLSMPMKVLL 420
            +     +R G E+  A +Q+  + +KT +       LSGGNQQK +L +WL    KVL+
Sbjct: 366 FAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLLTRPKVLI 425

Query: 421 LDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGIADRILVLCEGA 474
           LDEPTRG+D+GAK EIY+II  LAA+G A++++SSDL EV+G++DR++V+ EGA
Sbjct: 426 LDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEGA 479



 Score = 77.8 bits (190), Expect = 8e-19
 Identities = 58/220 (26%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 277 VRKGEILGLFGLVGAGRTELFRLLSGLERASAGQLELCGEPLHLQSPRDAIAAGVLLCPE 336
           VR+G +  L G  GAG++ L ++L+G+  A++G++ L G+     +P++A + G+ +  +
Sbjct: 32  VRRGRVHTLLGENGAGKSTLMKILAGVHGATSGEIVLDGQAYRPANPQEAASLGLAIVFQ 91

Query: 337 DRKKEGIIPLSSVAENINISARGAHSTFGWLLREGWEKGNADQQINAMKVKTPNAAQKIM 396
           +     +    +VAENI   A      FG++  +      A + +  +++   +  +K+ 
Sbjct: 92  ELS---LCNNLTVAENI--LATREPRRFGFINDKALV-AKAHRIVADLRLPI-DVTEKVG 144

Query: 397 YLSGGNQQKSILGRWLSMPMKVLLLDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSD 456
            LS   +Q   + + LS   KV++LDEPT  +       +++II  L  +G A+I +S  
Sbjct: 145 NLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEAEILFEIIGRLRQRGAAIIYISHR 204

Query: 457 LMEVMGIADRILVLCEGALRGEQTREHATESNLLQLALPR 496
           + E+M ++D I V+ +G       R+  T   L+ L + R
Sbjct: 205 MEEIMRLSDDITVIRDGEYVSTHARDEVTIETLIALMVGR 244



 Score = 68.6 bits (166), Expect = 5e-16
 Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 9/224 (4%)

Query: 24  ISFSAHPGQVHALMGENGAGKSTLLKILGGAYIPNSGTLHIGEQVMAFKSAADSIASGVA 83
           +SF    G++    G  G+G+S ++  L G     +GT+ +  +V+ F+S   +IA GV 
Sbjct: 279 VSFDVRAGEILGFFGLVGSGRSEVMNALFGMKSA-AGTVRLDGEVVRFRSPDQAIARGVG 337

Query: 84  VI---HQELHLVPEMSVAENLFLGHLPS---RFGVVNRGLLRKQALACLKGLADEIDPAE 137
            +    +E  LV   SV  N+ +  L       G +  G  R  A   +  L+ + +  E
Sbjct: 338 FVTENRKEEGLVLGHSVEWNISMAALADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLE 397

Query: 138 K-LGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMAIIARLRDEGKVVLY 196
              G LS G +Q + +AK L     V+  DEPT  +       +  II  L  EG  +L 
Sbjct: 398 TPAGALSGGNQQKIVLAKWLLTRPKVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILL 457

Query: 197 VSHRMEEVFRICNAVTVFKDGRYVRTFEDMSALTHDQLVTCMVG 240
           +S  + EV  + + V V  +G    T E  SALT + ++    G
Sbjct: 458 ISSDLPEVLGMSDRVVVMHEGAPGATLEG-SALTPETIMAHATG 500