Pairwise Alignments

Query, 500 a.a., L-arabinose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  374 bits (960), Expect = e-108
 Identities = 206/495 (41%), Positives = 305/495 (61%), Gaps = 5/495 (1%)

Query: 1   MTAAALRFDGIGKTFPGVKALDGISFSAHPGQVHALMGENGAGKSTLLKILGGAYIPNSG 60
           M         I K+F G+ AL  ++F   PG+VHAL+GENGAGKSTL+++LGG  IP+ G
Sbjct: 1   MVTELANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQG 60

Query: 61  TLHIGEQVMAFKSAADSIASGVAVIHQELHLVPEMSVAENLFLGHLPSRFGVVNRGLLRK 120
            + I  +    +   D+ A G+ VIHQEL L P++SVAEN+FLG LP+   +++R  LR+
Sbjct: 61  EVVINGKRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPT---LISRFSLRR 117

Query: 121 QALACLKGLADEIDPAEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRL 180
           +A   +  L  +IDP   +G LS+  +Q+VEIAKALS+   +I FDEPT+ L A++  +L
Sbjct: 118 RAKQLIDRLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKL 177

Query: 181 MAIIARLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFEDMSALTHDQLVTCMVG 240
             II  LRD G  ++Y+SHR++EVF I + +TV KDG  V T         D ++  MVG
Sbjct: 178 HQIIRGLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKI-DDIIRMMVG 236

Query: 241 RDIQDIYDYRP-REHGEVALKVDGLLGPGLREPVSFNVRKGEILGLFGLVGAGRTELFRL 299
           R I +++  R  R  G   L V  L    +   VSF+VR GEI+GL GL+G+GRTE+ R 
Sbjct: 237 RPIANMFPERSQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARA 296

Query: 300 LSGLERASAGQLELCGEPLHLQSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARG 359
           + G +   +G + L G+ L L+SPRDA+ AG+ L PEDRK+ G++    +  N  ++   
Sbjct: 297 IFGADPLDSGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMS 356

Query: 360 AHSTFGWLLREGWEKGNADQQINAMKVKTPNAAQKIMYLSGGNQQKSILGRWLSMPMKVL 419
           +       L+   E+ +      ++++K  +    +  LSGGNQQK +L +W      V+
Sbjct: 357 SVVNALGFLKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVI 416

Query: 420 LLDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGIADRILVLCEGALRGEQ 479
           +LDEPTRG+D+GAKAEIY +I+ LA  G AV+V+SS+  E+ G+ DR+L + +G +RGE 
Sbjct: 417 ILDEPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGEL 476

Query: 480 TREHATESNLLQLAL 494
           T  + +E NLL L++
Sbjct: 477 TPSNYSEENLLGLSM 491



 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 10/228 (4%)

Query: 273 VSFNVRKGEILGLFGLVGAGRTELFRLLSGLERASAGQLELCGEPLHLQSPRDAIAAGVL 332
           V+F+VR GE+  L G  GAG++ L R+L G    S G++ + G+   L+ PRDA A G++
Sbjct: 24  VNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVINGKRTELRDPRDARALGIV 83

Query: 333 LCPEDRKKEGIIPLSSVAENINISARGAHSTFGWLLREGWEKGNADQQINAMKVKTPNAA 392
           +  ++     + P  SVAENI +           L+     +  A Q I+ +     +  
Sbjct: 84  VIHQEL---ALAPDLSVAENIFLGELPT------LISRFSLRRRAKQLIDRLGFDI-DPG 133

Query: 393 QKIMYLSGGNQQKSILGRWLSMPMKVLLLDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIV 452
           + +  LS  +QQ   + + LS  +K+++ DEPT  +      +++QII  L  +G+ ++ 
Sbjct: 134 RLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIRGLRDRGVGIVY 193

Query: 453 VSSDLMEVMGIADRILVLCEGALRGEQTREHATESNLLQLALPRSVAN 500
           +S  L EV  IADR+ V+ +G   G          +++++ + R +AN
Sbjct: 194 ISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIAN 241