Pairwise Alignments

Query, 500 a.a., L-arabinose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  377 bits (968), Expect = e-109
 Identities = 202/489 (41%), Positives = 310/489 (63%), Gaps = 2/489 (0%)

Query: 6   LRFDGIGKTFPGVKALDGISFSAHPGQVHALMGENGAGKSTLLKILGGAYIPNSGTLHIG 65
           L  +G+ K FPGV ALD + F    G VHALMGENGAGKSTL+KIL G Y P+ G + + 
Sbjct: 24  LTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLR 83

Query: 66  EQVMAFKSAADSIASGVAVIHQELHLVPEMSVAENLFLGHLP-SRFGVVNRGLLRKQALA 124
              +  KS  D++ +G+A+IHQEL+L+P M+VAEN+++   P +RFG V+ G +R+    
Sbjct: 84  GAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREPKNRFGFVDHGEMRRMTAK 143

Query: 125 CLKGLADEIDPAEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMAII 184
             + L  ++DP  ++  LS+  RQ+VEIAKA+S  + V+  DEPTS+L+ RE+  L  II
Sbjct: 144 LFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEII 203

Query: 185 ARLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYVRTFEDMSALTHDQLVTCMVGRDIQ 244
             LR +G  ++Y++H+M E+F I +  +VF+DG+Y+ T    + +T D ++  MVGR+I 
Sbjct: 204 RDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLS-NEVTRDDIIRMMVGREIT 262

Query: 245 DIYDYRPREHGEVALKVDGLLGPGLREPVSFNVRKGEILGLFGLVGAGRTELFRLLSGLE 304
            ++       G+V L V  L   G+   VSF+VR GEILG+ GLVG+GR+ +   L G+ 
Sbjct: 263 QMFPKEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAETLFGVT 322

Query: 305 RASAGQLELCGEPLHLQSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARGAHSTF 364
            AS+G + + G+ + + S   AI   +    EDRK  G + +  + EN+ I+        
Sbjct: 323 PASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCLLILDILENMQIAVLQDKFVK 382

Query: 365 GWLLREGWEKGNADQQINAMKVKTPNAAQKIMYLSGGNQQKSILGRWLSMPMKVLLLDEP 424
              + E       ++    ++VKTPN  +++  LSGGNQQK ++GRWL    ++L+LDEP
Sbjct: 383 RGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLTNPRILILDEP 442

Query: 425 TRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGIADRILVLCEGALRGEQTREHA 484
           TRGID+GAKAEI++++  LA  G+AVI++SS++ EV+G++DRI+V+ EG + G   R  A
Sbjct: 443 TRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHEGRVTGILDRAEA 502

Query: 485 TESNLLQLA 493
           T+  +++LA
Sbjct: 503 TQIKVMELA 511



 Score = 94.4 bits (233), Expect = 9e-24
 Identities = 59/228 (25%), Positives = 119/228 (52%), Gaps = 6/228 (2%)

Query: 271 EPVSFNVRKGEILGLFGLVGAGRTELFRLLSGLERASAGQLELCGEPLHLQSPRDAIAAG 330
           + V F +++G +  L G  GAG++ L ++L+G+     G+++L G  + L+SP DA+  G
Sbjct: 40  DDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGIRLKSPLDALENG 99

Query: 331 VLLCPEDRKKEGIIPLSSVAENINISARGAHSTFGWLLREGWEKGNADQQINAMKVKTPN 390
           + +  ++     ++P  +VAENI I  R   + FG++   G  +    +    +K+    
Sbjct: 100 IAMIHQELN---LMPFMTVAENIWIR-REPKNRFGFV-DHGEMRRMTAKLFERLKIDLDP 154

Query: 391 AAQKIMYLSGGNQQKSILGRWLSMPMKVLLLDEPTRGIDIGAKAEIYQIIHNLAAQGIAV 450
             + + +LS  N+Q   + + +S    VL++DEPT  +     A +++II +L +QGI +
Sbjct: 155 EIE-VRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEIIRDLRSQGIGI 213

Query: 451 IVVSSDLMEVMGIADRILVLCEGALRGEQTREHATESNLLQLALPRSV 498
           + ++  + E+  IAD   V  +G   G       T  +++++ + R +
Sbjct: 214 VYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGREI 261