Pairwise Alignments

Query, 334 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 27/275 (9%)

Query: 7   LRSLCCAAVAVSAMSLSGLLLAAEEVKIGFLVKQAEEPWFQTEWAFAEKAGKEHGFTVIK 66
           +R L   A+  + M      LA  +  IGF + + ++ +        EK       T  +
Sbjct: 1   MRKLTVLAMLSAGMGFGTQALA--DTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNT--R 56

Query: 67  IAVPDGEKTLSA----IDSLAANGAKGFVICPPDVSLGPAIVAKAKANGLKVIAVD-DRF 121
           I + D + + S     +D + A G +   I   D +  P I+ KAK + + V+  + +  
Sbjct: 57  ILMNDSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPS 116

Query: 122 VDAKGNFMEDVPYLGMAAFEVGQKQGAAMAAEAKKR-GWDWKD----TYAVINTFNELDT 176
            +A  ++ +   Y+G  + E G  QG  ++A+ K    WD        Y ++        
Sbjct: 117 AEAMASY-DKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDGVLQYVMLKGEPGHPD 175

Query: 177 GKKRTDGSVKSLEEAGIPKDHILFTAA--KTLDVPGSMDATNSALVKLPSGAKNLIIGGM 234
            + RT  SV+++ + GI    +        T      MDA  S     P+G+K  ++   
Sbjct: 176 AEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSG----PNGSKIEVVIAN 231

Query: 235 NDNTVLGGVRATESAGFKAANVIGIGINGTDAIGE 269
           ND   +G + A   AG K      I + G DA+ E
Sbjct: 232 NDGMAMGAIEALRGAGQK------IPVFGVDALAE 260