Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  262 bits (669), Expect = 5e-75
 Identities = 137/246 (55%), Positives = 175/246 (71%), Gaps = 6/246 (2%)

Query: 1   MIVVEKLTKQFKGQVVLNGIDLEVKEGEVVAIIGPSGSGKTTFLRCLNFLEQPTSGRIKV 60
           MI +  L K +    VL GI+  +++GEVV++IGPSGSGK+TFLRC+N LE PT G    
Sbjct: 1   MINITNLHKSYGDNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQG---- 56

Query: 61  GDIEIDSSKPVNQQASLVRRLRQHVGFVFQSFNLFPHRTALENVIEGPTVVKKMPREAAD 120
            DIEI+    +  + + V +LRQ VG VFQ+FNLFPH+T L+N+   P  +K M +  AD
Sbjct: 57  -DIEIEGQS-ITAKDACVDKLRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQAEAD 114

Query: 121 AFGRKLLARVGLAGKEDAYPRRLSGGQQQRVAIARALAMEPEVILFDEPTSALDPELVGE 180
                LL +VGL  K +AYP  LSGGQ+QRVAIARALAMEP+++LFDEPTSALDPE+VG+
Sbjct: 115 NKALALLTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGD 174

Query: 181 VLATIRSLAEENRTMVIVTHEMSFARDVANRVIFFDKGVIVEQGEAKALFANPKEERTKQ 240
           VL  ++ LA++  TMVIVTHEM FARDV++RVIF D G +VE    + LF  PKE RT+ 
Sbjct: 175 VLDVMKDLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEARTQS 234

Query: 241 FLSKFL 246
           FLSK L
Sbjct: 235 FLSKVL 240