Pairwise Alignments

Query, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

Subject, 448 a.a., Major facilitator superfamily from Pseudomonas syringae pv. syringae B728a

 Score =  327 bits (838), Expect = 5e-94
 Identities = 160/412 (38%), Positives = 248/412 (60%), Gaps = 11/412 (2%)

Query: 8   IRRITLKLIPFLILLYLIAYVDRSAVGFAKLHMGADVGIGDAAYGLGAGLFFIGYFLFEI 67
           + ++   ++P  ++++++ Y+DR  +GF + HM  D+GIG AAYGLGAGLFFIGY LFE+
Sbjct: 20  VSKVKRHVLPLFVIMFIVNYIDRVNIGFVRSHMEHDLGIGAAAYGLGAGLFFIGYALFEV 79

Query: 68  PSNLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGVLYYI 127
           PSN++L + GAR W  RIM+TWG +   MAF+Q    FY++RFLLG AEAGFFPGV+YY 
Sbjct: 80  PSNILLQKVGARIWLTRIMLTWGIVAACMAFIQTETHFYILRFLLGVAEAGFFPGVIYYF 139

Query: 128 TQWFPVRHRGKILGLFILSQPIAMMITGPVSGGLLGMDGMLGLHGWQWLFIVIGTPAILL 187
           T+W P   RGK + +F+    IA +I+GP+SG LL + G  GL GWQW++ + G  ++ L
Sbjct: 140 TRWLPGVERGKAIAIFLSGSAIASLISGPLSGLLLQITG-FGLKGWQWMYFIEGMFSVGL 198

Query: 188 TWPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQAYGQTRHGNPLHA-----LKDKRVL 242
            + V  +L   P    W++ +E+  L   +  +  A        P+ A     LKD +++
Sbjct: 199 CFFVWFWLDSNPHDAKWLTREEQDALVNAIDAEQAA---REAATPVKASIGKLLKDGQII 255

Query: 243 LLALFYLPVTLSIYGLGLWLPTLIKQFGG-SDLTTGFISAVPYIFGIIGLLIIPRSSDRL 301
           L  L Y  + L+IY    WLP++I++ G  +D   G  +++P++  IIG+ +    S + 
Sbjct: 256 LFCLIYFFIQLTIYAATFWLPSIIRKMGSLTDFEVGMFNSIPWLLSIIGMYVFASLSAKW 315

Query: 302 NDRYGHLAVLYVLGAIGLFFSAWLTVPLLQMAALCLAAFAMFSCTAVFWTLPGRFFAGAS 361
             +   +A+  ++ A G+F S     P+    A+C AA    S +++FW +P  +     
Sbjct: 316 KRQQAWVAIALLIAAAGMFMST-TGSPIFAFVAICFAALGFKSASSLFWPIPQAYLDARI 374

Query: 362 AAAGIALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLTF 413
           AAA IALINSVGNLGG++ P   G L+E+TG++  GLY L+   +   ++ F
Sbjct: 375 AAAVIALINSVGNLGGFVAPTTFGLLEEHTGSIQGGLYGLTATSIIAAIIVF 426