Pairwise Alignments

Query, 578 a.a., L-arabonate dehydratase (EC 4.2.1.25) (from data) from Pseudomonas simiae WCS417

Subject, 619 a.a., dihydroxy-acid dehydratase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  221 bits (564), Expect = 5e-62
 Identities = 179/577 (31%), Positives = 277/577 (48%), Gaps = 59/577 (10%)

Query: 6   PGLRSAQWFGTADKNGFMYRSWMKNQGIADHQFHGKPIIGICNTWSELTPCNAHFRQIAE 65
           P LRSA    T  +N    R+  +  G+ D+ F GKPII I N++++  P + H + +  
Sbjct: 2   PKLRSAT--STEGRNMAGARALWRATGVKDNDF-GKPIIAIANSFTQFVPGHVHLKDMGS 58

Query: 66  HVKRGVIEAGGFPVEFPVFSNGES-NLRPTAML----TRNLASMDVEEAIRGNPIDGVVL 120
            V   + EAGG   EF   +  +   +    ML    +R L +  VE  +  +  D +V 
Sbjct: 59  LVASAIEEAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADALVC 118

Query: 121 LTGCDKTTPALLMGAASCDVPAIVVTGGPMLNGKHKGQDIGSGTVVWQLSEQVKAGTITL 180
           ++ CDK TP +LM A   ++P + V+GGPM  GK K  D      +          +++ 
Sbjct: 119 ISNCDKITPGMLMAALRLNIPVVFVSGGPMEAGKTKLSDKLIKLDLVDAMVAAADSSVSD 178

Query: 181 DDFLAAEGGMSRSAGTCNTMGTASTMACMAEALGTSLPHNAAIPAVDARRYVLAHMSGMR 240
           +D    E     + G+C+ M TA++M C+ EALG SLP N ++ A  + R  L   +G R
Sbjct: 179 EDSAKIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSMLATHSDRRELFLEAGRR 238

Query: 241 AVEMVREDLKLS-------KILTKEAFENAIRVNAAIGGSTNAVIHLKAIAGRIGVELDL 293
            + + +   +          I   +AFENA  ++ A+GGS+N V+HL A A    V   +
Sbjct: 239 VMALTKRYYEQDDTSALPRNIACFKAFENATALDIAMGGSSNTVLHLLAAAQEAEVAFTM 298

Query: 294 DDWTRIGRGMPTIVDLQPS-GRFLMEEFYYAGGLPAVLRRLGEANL----IPH------P 342
           DD  R+ R +P +  + PS  ++ ME+ + AGG+  +L  L  A L    +PH       
Sbjct: 299 DDIDRMSRLVPHLCKVAPSTPKYHMEDVHRAGGVMGILGELDRAGLLHTDVPHVAADAGG 358

Query: 343 NALTVNGKSLGENTQDSPI----------------YGQD------------EVIRTLDNP 374
           N  +V  K     TQD  +                + QD              IR+ +  
Sbjct: 359 NLKSVLAKYDVMQTQDDNVKQFFMAGPAGIPTTKAFSQDCRWPSLDDDRREGCIRSREFA 418

Query: 375 IRADGGICVLRGNLAPLGAVLKPSAASPALMQHRGRAVVFENFDMYKARINDPELDVDAN 434
              +GG+ VL GNLA  G ++K +    + +   G A V+E+ D   A I   E  V A 
Sbjct: 419 FSQEGGLAVLSGNLAENGCIVKTAGVDESNLIFVGSARVYESQDDAVAGILGGE--VVAG 476

Query: 435 SILVMKNCGPKGYPGMAEVGNMGLPAKLLAQGV-TDMVRISDARMSGTAYGTVVLHVAPE 493
            ++V++  GPKG PGM E+  +   + L ++G+      I+D R SG   G  + HV+PE
Sbjct: 477 DVVVIRYEGPKGGPGMQEM--LYPTSYLKSRGLGKACALITDGRFSGGTSGLSIGHVSPE 534

Query: 494 AAAGGPLATVKEGDWIELDCANGRLHLDIPDAELAAR 530
           AAAGG +A ++ GD IE+D     + L + DAELA R
Sbjct: 535 AAAGGTIALIENGDRIEIDIPARSIKLAVSDAELAGR 571