Pairwise Alignments

Query, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (568), Expect = 2e-62
 Identities = 128/373 (34%), Positives = 198/373 (53%)

Query: 274 WRFIGLIKRDEVMAGATRLTWLIAAIAAVLALVFAIVGASFASVIVRPIRGVADGLQEIA 333
           W+ IG I    + A   +L W I     V A V  +   +   V  +P+  +   +  ++
Sbjct: 204 WQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANLS 263

Query: 334 EGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLVQRIGNASSDLQSAAADTREVAHNM 393
           +G GDLT++L V+ KDE   +    N F+  + Q+   + ++S ++  A       A + 
Sbjct: 264 QGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSN 323

Query: 394 NQAAGRQREAVELVSTAFNEMVATANEVARSCSAAATSADEGYRDVHDGQQHIGEATGSV 453
                +  +  E   TA  EM A+A  +A+S   AA   +   R   + +Q + EA  SV
Sbjct: 324 LNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNSV 383

Query: 454 LKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFA 513
             L   +    +T+ ++ +D+K IN++L  I +IAEQTNLLALNAAIEAARAG+QGRGFA
Sbjct: 384 NGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFA 443

Query: 514 VVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQQMQGSLLVSHTSVERIQQARDSFD 573
           VVADEVRALA RT  ST +I+ +L  L   T+ V ++M  + +    + ER     DS +
Sbjct: 444 VVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSLN 503

Query: 574 KIRGSVDSIRDQNTQIATAAEEQHQVAEEINRHIAQIHADAQLVEGFAHSAQTGSGRLTD 633
            +  SV  + + NT IAT+A EQ QV  E+++++A I    + +   A    + S  L +
Sbjct: 504 VVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQN 563

Query: 634 ISGQLKGLVGRFK 646
            S  L  +VGRF+
Sbjct: 564 TSHALSDVVGRFR 576